Top cofit genes for b2003 from Escherichia coli BW25113

yeeT: CP4-44 prophage; predicted protein (NCBI)
SEED: Uncharacterized protein YkfH

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b1617	uidA	beta-D-glucuronidase (NCBI)	no	0.20
2	b2668	ygaP	predicted inner membrane protein with hydrolase activity (NCBI)	no	0.19
3	b2012	yeeD	hypothetical protein (NCBI)	no	0.18
4	b0295	ykgL	hypothetical protein (NCBI)	no	0.18
5	b0349	mhpC	2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase (VIMSS)	no	0.18
6	b0046	kefF	glutathione-regulated potassium-efflux system ancillary protein (NCBI)	no	0.18
7	b4326	yjiD	orf, hypothetical protein (VIMSS)	no	0.18
8	b2382	ypdC	predicted DNA-binding protein (NCBI)	no	0.18
9	b1733	chbG	hypothetical protein (NCBI)	no	0.17
10	b0825	mipB	putative transaldolase (VIMSS)	no	0.17
11	b4070	nrfA	nitrite reductase, formate-dependent, cytochrome (NCBI)	no	0.17
12	b2217	rcsB	DNA-binding response regulator in two-component regulatory system with RcsC and YojN (NCBI)	no	0.16
13	b2406	xapB	xanthosine transporter (NCBI)	no	0.16
14	b4501	torI	response regulator inhibitor for tor operon (NCBI)	no	0.16
15	b4408	csrB	CsrA-binding sRNA, antagonizing CsrA regulation (NCBI)	no	0.16
16	b0810	glnP	glutamine ABC transporter permease protein (NCBI)	no	0.15
17	b1607	ydgC	conserved inner membrane protein associated with alginate biosynthesis (NCBI)	no	0.15
18	b3427	yzgL	orf, hypothetical protein (VIMSS)	no	0.15
19	b4252	yjgK	orf, hypothetical protein (VIMSS)	no	0.15
20	b2211	yojI	fused predicted multidrug transport subunits of ABC superfamily: membrane component/ATP-binding component (NCBI)	no	0.15

Or look for negative cofitness