Top cofit genes for b1829 from Escherichia coli BW25113

htpX: heat shock protein HtpX (NCBI)
SEED: Probable protease HtpX (EC 3.4.24.-)
KEGG: heat shock protein HtpX

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b1855	lpxM	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI)	0.24	0.31
2	b3700	recF	recombination protein F (NCBI)	0.61	0.30
3	b4484	cpxP	periplasmic protein combats stress (NCBI)	0.54	0.29
4	b0472	recR	recombination protein RecR (NCBI)	0.57	0.28
5	b0060	polB	DNA polymerase II (NCBI)	no	0.27
6	b3660	yicL	predicted inner membrane protein (NCBI)	no	0.26
7	b1184	umuC	DNA polymerase V subunit UmuC (NCBI)	no	0.26
8	b3197	kdsD	D-arabinose 5-phosphate isomerase (NCBI)	no	0.25
9	b3813	uvrD	DNA-dependent ATPase I and helicase II (NCBI)	no	0.25
10	b1913	uvrC	excinuclease ABC, subunit C; repair of UV damage to DNA (VIMSS)	0.34	0.25
11	b2617	smpA	small membrane protein A (VIMSS)	no	0.24
12	b0577	ybdG	predicted mechanosensitive channel (NCBI)	no	0.23
13	b0015	dnaJ	chaperone Hsp40, co-chaperone with DnaK (NCBI)	0.47	0.23
14	b2474	ypfI	predicted hydrolase (NCBI)	0.35	0.23
15	b0191	yaeJ	hypothetical protein (NCBI)	no	0.23
16	b0949	uup	fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI)	0.48	0.22
17	b3646	yicG	orf, hypothetical protein (VIMSS)	no	0.22
18	b0779	uvrB	excinuclease ABC subunit B (NCBI)	no	0.22
19	b4078	yjcO	hypothetical protein (NCBI)	no	0.22
20	b3644	yicC	hypothetical protein (NCBI)	0.84	0.22

Or look for negative cofitness