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  • Top cofit genes for b1789 from Escherichia coli BW25113

    yeaL: conserved inner membrane protein (NCBI)
    SEED: Putative inner membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 b3092 uxaC glucuronate isomerase (NCBI) no 0.25
    2 b3091 uxaA altronate hydrolase (NCBI) no 0.20
    3 b1433 b1433 putative membrane transport protein (VIMSS) no 0.19
    4 b2737 ygbK hypothetical protein (NCBI) no 0.18
    5 b1342 ydaN zinc transporter (NCBI) no 0.17
    6 b1045 ymdB hypothetical protein (NCBI) no 0.17
    7 b0239 frsA fermentation/respiration switch protein (NCBI) no 0.16
    8 b1024 ycdS predicted outer membrane protein (NCBI) no 0.16
    9 b3698 yidB orf, hypothetical protein (VIMSS) no 0.16
    10 b1454 yncG predicted enzyme (NCBI) 0.37 0.16
    11 b2505 yfgH predicted outer membrane lipoprotein (NCBI) no 0.16
    12 b3093 exuT hexuronate transporter (NCBI) no 0.16
    13 b1954 dsrA regulatory antisense RNA (NCBI) no 0.15
    14 b2385 ypdF predicted peptidase (NCBI) no 0.15
    15 b4349 hsdM DNA methylase M (NCBI) no 0.15
    16 b3328 gspG pseudopilin, cryptic, general secretion pathway (NCBI) no 0.15
    17 b2646 ypjF CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) no 0.15
    18 b4543 ypaA predicted protein (NCBI) no 0.15
    19 b3265 acrE cytoplasmic membrane lipoprotein (NCBI) no 0.15
    20 b3349 slyD FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) (NCBI) no 0.15

    Or look for negative cofitness