Top cofit genes for b1741 from Escherichia coli BW25113

ydjQ: endonuclease of nucleotide excision repair (NCBI)
SEED: Excinuclease cho (excinuclease ABC alternative C subunit)
KEGG: excinuclease Cho

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b2453	eutG	ethanolamine utilization; homolog of Salmonella enzyme, similar to iron-containing alcohol dehydrogenase (VIMSS)	no	0.18
2	b0970	yccA	inner membrane protein (NCBI)	0.29	0.17
3	b0786	ybhL	predicted inner membrane protein (NCBI)	no	0.16
4	b4296	yjhF	KpLE2 phage-like element; predicted transporter (NCBI)	no	0.16
5	b3379	php	predicted hydrolase (NCBI)	0.28	0.16
6	b2385	ypdF	predicted peptidase (NCBI)	no	0.15
7	b4069	acs	acetyl-coenzyme A synthetase (NCBI)	no	0.14
8	b1002	agp	glucose-1-phosphatase/inositol phosphatase (NCBI)	no	0.14
9	b3880	yihS	orf, hypothetical protein (VIMSS)	no	0.14
10	b4523	yciX	hypothetical protein (RefSeq)	no	0.14
11	b3878	yihQ	alpha-glucosidase (NCBI)	no	0.14
12	b1380	ldhA	D-lactate dehydrogenase (NCBI)	no	0.13
13	b2014	yeeF	putative amino acid/amine transport protein (VIMSS)	no	0.13
14	b2274	yfbO	predicted protein (RefSeq)	no	0.13
15	b1194	ycgR	protein involved in flagellar function (NCBI)	0.22	0.13
16	b1886	tar	methyl-accepting chemotaxis protein II (NCBI)	0.53	0.13
17	b3905	rhaS	DNA-binding transcriptional activator, L-rhamnose-binding (NCBI)	no	0.13
18	b1905	ftn	ferritin iron storage protein (cytoplasmic) (NCBI)	no	0.13
19	b4324	uxuR	DNA-binding transcriptional repressor (NCBI)	no	0.12
20	b3466	yhhL	conserved inner membrane protein (NCBI)	0.65	0.12

Or look for negative cofitness