Top cofit genes for b1678 from Escherichia coli BW25113

ynhG: hypothetical protein (NCBI)
SEED: L,D-transpeptidase YnhG

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b2096	gatY	tagatose-bisphosphate aldolase 1 (VIMSS)	no	0.27
2	b1251	yciI	orf, hypothetical protein (VIMSS)	0.39	0.24
3	b2092	gatC	galactitol-specific enzyme IIC component of PTS (NCBI)	no	0.24
4	b1857	yebL	putative adhesin (VIMSS)	0.33	0.23
5	b2095	gatZ	D-tagatose 1,6-bisphosphate aldolase 2, subunit (NCBI)	no	0.23
6	b0483	ybaQ	orf, hypothetical protein (VIMSS)	0.56	0.22
7	b1442	ydcU	predicted spermidine/putrescine transporter subunit (NCBI)	no	0.22
8	b0107	hofB	conserved protein with nucleoside triphosphate hydrolase domain (NCBI)	no	0.22
9	b2009	sbmC	DNA gyrase inhibitor (NCBI)	0.56	0.22
10	b2600	tyrA	fused chorismate mutase T/prephenate dehydrogenase (NCBI)	no	0.22
11	b2093	gatB	galactitol-specific enzyme IIB component of PTS (NCBI)	no	0.22
12	b1869	yecN	orf, hypothetical protein (VIMSS)	0.34	0.22
13	b3281	aroE	dehydroshikimate reductase, NAD(P)-binding (NCBI)	no	0.21
14	b1929	yedE	predicted inner membrane protein (NCBI)	0.24	0.21
15	b0075	leuL	leu operon leader peptide (NCBI)	no	0.21
16	b2094	gatA	galactitol-specific enzyme IIA component of PTS (NCBI)	no	0.21
17	b0147	yadP	orf, hypothetical protein (VIMSS)	no	0.21
18	b2173	yeiR	predicted enzyme (NCBI)	no	0.21
19	b1999	yeeP	putative histone (VIMSS)	no	0.21
20	b1424	mdoD	glucan biosynthesis protein, periplasmic (RefSeq)	no	0.21

Or look for negative cofitness