Top cofit genes for b1664 from Escherichia coli BW25113

ydhQ: hypothetical protein (NCBI)
SEED: Possible enzyme

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b4308	yjhR	KpLE2 phage-like element; predicted frameshift suppressor (NCBI)	no	0.39
2	b1999	yeeP	putative histone (VIMSS)	no	0.34
3	b2775	yqcE	predicted transporter (NCBI)	no	0.31
4	b3360	pabA	para-aminobenzoate synthase component II (NCBI)	no	0.30
5	b1139	lit	e14 prophage; cell death peptidase, inhibitor of T4 late gene expression (NCBI)	no	0.30
6	b2270	yfbK	hypothetical protein (NCBI)	no	0.29
7	b2355	yfdL	CPS-53 (KpLE1) prophage; conserved protein (RefSeq)	no	0.29
8	b0703	ybfO	conserved protein, rhs-like (RefSeq)	no	0.28
9	b4271	intB	KpLE2 phage-like element; predicted integrase (RefSeq)	no	0.28
10	b1256	ompW	outer membrane protein W (NCBI)	0.56	0.28
11	b1151	ymfO	e14 prophage; conserved protein (RefSeq)	no	0.28
12	b3619	rfaD	ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI)	no	0.27
13	b3621	rfaC	ADP-heptose:LPS heptosyl transferase I (NCBI)	no	0.27
14	b2001	b2001	orf, hypothetical protein (VIMSS)	no	0.27
15	b3052	rfaE	fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI)	no	0.27
16	b2577	yfiE	putative transcriptional regulator LYSR-type (VIMSS)	no	0.27
17	b4469	ygiQ	hypothetical protein (NCBI)	no	0.27
18	b2261	menC	O-succinylbenzoate synthase (NCBI)	no	0.26
19	b2845	yqeG	predicted transporter (NCBI)	0.33	0.26
20	b2196	ccmF	heme lyase, CcmF subunit (NCBI)	no	0.26

Or look for negative cofitness