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  • Top cofit genes for b1585 from Escherichia coli BW25113

    ynfC: orf, hypothetical protein (VIMSS)
    SEED: Hypothetical UPF0257 lipoprotein ynfC precursor

    Rank Hit Name Description Conserved? Cofitness  
    1 b2263 yfbB predicted peptidase (NCBI) no 0.21
    2 b2104 thiM hydroxyethylthiazole kinase (NCBI) no 0.18
    3 b2506 yfgI hypothetical protein (NCBI) no 0.17
    4 b1285 gmr modulator of Rnase II stability (NCBI) no 0.16
    5 b4122 fumB anaerobic class I fumarate hydratase (fumarase B) (NCBI) no 0.15
    6 b2603 yfiR hypothetical protein (NCBI) 0.23 0.15
    7 b4533 ynfO Qin prophage; predicted protein (NCBI) no 0.15
    8 b4019 metH B12-dependent methionine synthase (NCBI) no 0.14
    9 b0228 yafM hypothetical protein (NCBI) no 0.14
    10 b4538 yoeF hypothetical protein (RefSeq) no 0.14
    11 b3262 yhdJ putative methyltransferase (VIMSS) no 0.14
    12 b2177 yejA orf, hypothetical protein (VIMSS) no 0.14
    13 b4335 yjiM orf, hypothetical protein (VIMSS) no 0.14
    14 b2248 yfaX predicted DNA-binding transcriptional regulator (NCBI) 0.25 0.14
    15 b0122 yacC orf, hypothetical protein (VIMSS) no 0.14
    16 b3773 ilvY DNA-binding transcriptional dual regulator (NCBI) no 0.14
    17 b0296 ykgM 50S ribosomal protein L31 (NCBI) no 0.14
    18 b1752 ydjZ conserved inner membrane protein (NCBI) no 0.14
    19 b1232 purU formyltetrahydrofolate deformylase (NCBI) no 0.14
    20 b3598 yibI predicted inner membrane protein (NCBI) no 0.14

    Or look for negative cofitness