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Cofit
Top cofit genes for b1577 from
Escherichia coli BW25113
ydfE
:
Qin prophage; predicted protein (RefSeq)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
b2674
nrdI
hypothetical protein (NCBI)
no
0.19
2
b3879
yihR
putative aldose-1-epimerase (EC 5.1.3.3) (VIMSS)
no
0.19
3
b0291
yagX
predicted aromatic compound dioxygenase (NCBI)
no
0.18
4
b1311
ycjO
predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI)
no
0.17
5
b4456
ryiA
regulatory sRNA (NCBI)
no
0.16
6
b0363
yaiP
predicted glucosyltransferase (NCBI)
no
0.16
7
b3820
yigI
orf, hypothetical protein (VIMSS)
no
0.16
8
b1317
ycjU
predicted beta-phosphoglucomutase (NCBI)
no
0.16
9
b3142
yraH
predicted fimbrial-like adhesin protein (NCBI)
no
0.16
10
b0681
ybfM
predicted outer membrane porin (NCBI)
no
0.16
11
b4348
hsdS
specificity determinant for hsdM and hsdR (NCBI)
no
0.15
12
b0387
yaiI
orf, hypothetical protein (VIMSS)
no
0.15
13
b1484
ddpD
D-ala-D-ala transporter subunit (NCBI)
no
0.15
14
b3263
yhdU
predicted membrane protein (NCBI)
no
0.15
15
b1370
insH-5
Rac prophage; IS5 transposase and trans-activator (NCBI)
no
0.15
16
b1180
ycgM
predicted isomerase/hydrolase (NCBI)
no
0.15
17
b3127
garP
predicted (D)-galactarate transporter (NCBI)
no
0.15
18
b3909
kdgT
2-keto-3-deoxy-D-gluconate transport system (VIMSS)
no
0.15
19
b1524
yneH
predicted glutaminase (NCBI)
no
0.14
20
b0845
ybjJ
predicted transporter (NCBI)
no
0.14
Or look for
negative cofitness