Top cofit genes for b1545 from Escherichia coli BW25113

pinQ: Qin prophage; predicted site-specific recombinase (NCBI)
SEED: Mobile element protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b1497	b1497	putative enzyme (VIMSS)	no	0.61
2	b2055	wcaE	predicted glycosyl transferase (NCBI)	no	0.60
3	b1576	ydfD	Qin prophage; predicted protein (NCBI)	no	0.58
4	b4590	ybfK	hypothetical protein (RefSeq)	no	0.57
5	b1257	yciE	hypothetical protein (NCBI)	no	0.56
6	b4279	yjhB	putative transport protein (VIMSS)	no	0.56
7	b1363	trkG	Rac prophage; potassium transporter subunit (NCBI)	no	0.56
8	b0500	ybbD	hypothetical protein (RefSeq)	no	0.55
9	b0603	ybdO	predicted DNA-binding transcriptional regulator (NCBI)	no	0.54
10	b2847	yqeI	predicted transcriptional regulator (NCBI)	no	0.54
11	b1167	ymgC	hypothetical protein (NCBI)	no	0.53
12	b4497	yeeL	no description	no	0.53
13	b1409	ynbB	predicted CDP-diglyceride synthase (NCBI)	no	0.53
14	b1499	ydeO	predicted DNA-binding transcriptional acfivator (NCBI)	no	0.53
15	b1165	ymgA	hypothetical protein (NCBI)	no	0.52
16	b0279	yagM	CP4-6 prophage; predicted protein (NCBI)	no	0.51
17	b1351	racC	Rac prophage; predicted protein (NCBI)	no	0.51
18	b0326	yahL	hypothetical protein (NCBI)	no	0.51
19	b4253	yjgL	orf, hypothetical protein (VIMSS)	no	0.51
20	b1407	ydbD	orf, hypothetical protein (VIMSS)	no	0.49

Or look for negative cofitness