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Cofit
Top cofit genes for b1506 from
Escherichia coli BW25113
yneL
:
predicted transcriptional regulator (NCBI)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
b1691
ydiN
predicted transporter (RefSeq)
no
0.28
2
b1028
ymdE
orf, hypothetical protein (VIMSS)
no
0.27
3
b2109
yehB
predicted outer membrane protein (NCBI)
no
0.26
4
b1600
mdtJ
multidrug efflux system transporter (NCBI)
no
0.26
5
b1503
ydeR
predicted fimbrial-like adhesin protein (NCBI)
no
0.25
6
b1454
yncG
predicted enzyme (NCBI)
no
0.24
7
b2252
ais
hypothetical protein (NCBI)
no
0.24
8
b1579
intQ
Qin prophage; predicted defective integrase (RefSeq)
no
0.24
9
b1496
yddA
fused predicted multidrug transporter subunits of ABC superfamily: membrane component/ATP-binding component (NCBI)
no
0.24
10
b1689
b1689
orf, hypothetical protein (VIMSS)
no
0.23
11
b2085
b2085
orf, hypothetical protein (VIMSS)
no
0.22
12
b2271
yfbL
putative aminopeptidase (VIMSS)
no
0.21
13
b1969
yedW
putative 2-component transcriptional regulator (VIMSS)
no
0.21
14
b3480
nikE
nickel transporter subunit (NCBI)
no
0.21
15
b2274
yfbO
predicted protein (RefSeq)
no
0.21
16
b3629
rfaS
lipopolysaccharide core biosynthesis protein (NCBI)
no
0.20
17
b0535
fimZ
predicted DNA-binding transcriptional regulator (NCBI)
no
0.20
18
b3478
nikC
nickel transporter subunit (NCBI)
no
0.20
19
b1762
b1762
orf, hypothetical protein (VIMSS)
no
0.20
20
b0730
mngR
DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI)
no
0.20
Or look for
negative cofitness