Top cofit genes for b1271 from Escherichia coli BW25113

yciK: short chain dehydrogenase (NCBI)
SEED: YciK-like oxidoreductase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b3990	thiH	thiamine biosynthesis protein ThiH (NCBI)	0.52	0.18
2	b2562	yfhL	predicted 4Fe-4S cluster-containing protein (NCBI)	0.28	0.17
3	b2903	gcvP	glycine dehydrogenase (NCBI)	0.63	0.17
4	b1273	yciN	hypothetical protein (NCBI)	no	0.17
5	b3994	thiC	thiamine biosynthesis protein ThiC (NCBI)	0.55	0.17
6	b2904	gcvH	glycine cleavage system protein H (NCBI)	0.82	0.17
7	b2771	ygcS	putative transport protein (VIMSS)	no	0.17
8	b2320	pdxB	erythronate-4-phosphate dehydrogenase (NCBI)	0.53	0.17
9	b3829	metE	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase (NCBI)	no	0.16
10	b1004	wrbA	TrpR binding protein WrbA (NCBI)	0.56	0.16
11	b2817	b2817	putative amidase (VIMSS)	0.42	0.16
12	b2564	pdxJ	pyridoxal phosphate biosynthetic protein (NCBI)	no	0.16
13	b0052	pdxA	4-hydroxythreonine-4-phosphate dehydrogenase (NCBI)	no	0.16
14	b2905	gcvT	glycine cleavage system aminomethyltransferase T (NCBI)	0.82	0.15
15	b4407	thiS	sulfur carrier protein ThiS (NCBI)	no	0.15
16	b2951	yggS	predicted enzyme (NCBI)	0.52	0.15
17	b3828	metR	DNA-binding transcriptional activator, homocysteine-binding (NCBI)	0.63	0.15
18	b4053	alr	alanine racemase (NCBI)	no	0.15
19	b4041	plsB	glycerol-3-phosphate acyltransferase (VIMSS)	0.40	0.15
20	b3992	thiF	thiamin biosynthesis, thiazole moiety (VIMSS)	no	0.14

Or look for negative cofitness