Top cofit genes for b1109 from Escherichia coli BW25113

ndh: respiratory NADH dehydrogenase 2/cupric reductase (NCBI)
SEED: NADH dehydrogenase (EC 1.6.99.3)
KEGG: NADH dehydrogenase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b2906	visC	hypothetical protein (NCBI)	0.60	0.36
2	b0431	cyoB	cytochrome o ubiquinol oxidase subunit I (NCBI)	0.86	0.34
3	b3414	gntY	predicted gluconate transport associated protein (NCBI)	0.90	0.33
4	b0432	cyoA	cytochrome o ubiquinol oxidase subunit II (NCBI)	0.62	0.33
5	b0428	cyoE	protoheme IX farnesyltransferase (NCBI)	0.49	0.31
6	b0430	cyoC	cytochrome o ubiquinol oxidase subunit III (NCBI)	0.84	0.31
7	b2113	mrp	putative ATPase (VIMSS)	0.89	0.30
8	b3493	pitA	phosphate transporter, low-affinity (NCBI)	0.84	0.30
9	b0429	cyoD	cytochrome o ubiquinol oxidase subunit IV (NCBI)	0.83	0.29
10	b3396	mrcA	peptidoglycan synthetase; penicillin-binding protein 1A (VIMSS)	0.68	0.28
11	b2945	endA	DNA-specific endonuclease I (NCBI)	no	0.28
12	b0611	rna	ribonuclease I (NCBI)	no	0.28
13	b2895	fldB	flavodoxin 2 (NCBI)	0.89	0.27
14	b3147	yraM	hypothetical protein (NCBI)	no	0.27
15	b2436	hemF	coproporphyrinogen III oxidase (NCBI)	0.85	0.27
16	b3844	fre	NAD(P)H-flavin reductase (NCBI)	0.72	0.27
17	b2167	fruA	fused fructose-specific PTS enzymes: IIBcomponent/IIC components (NCBI)	0.67	0.26
18	b3868	glnG	fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI)	0.89	0.26
19	b3927	glpF	glycerol facilitator (NCBI)	0.54	0.26
20	b2819	recD	exonuclease V (RecBCD complex), alpha chain (NCBI)	0.57	0.26

Or look for negative cofitness