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Cofit
Protein
Homologs
Top cofit genes for b1056 from
Escherichia coli BW25113
yceI
:
hypothetical protein (NCBI)
SEED: Protein yceI precursor
Rank
Hit
Name
Description
Conserved?
Cofitness
1
b1963
b1963
orf, hypothetical protein (VIMSS)
no
0.44
2
b1444
ydcW
medium chain aldehyde dehydrogenase (NCBI)
no
0.40
3
b0101
yacG
zinc-binding protein (NCBI)
no
0.39
4
b4697
yrdF
no description
no
0.38
5
b1635
gst
glutathionine S-transferase (NCBI)
0.37
0.37
6
b3360
pabA
para-aminobenzoate synthase component II (NCBI)
0.49
0.37
7
b2456
cchB
predicted carboxysome structural protein, ethanolamine utilization protein (NCBI)
no
0.37
8
b1999
yeeP
putative histone (VIMSS)
no
0.37
9
b0251
yafY
CP4-6 prophage; predicted DNA-binding transcriptional regulator (RefSeq)
no
0.37
10
b2540
hcaC
3-phenylpropionate dioxygenase, predicted ferredoxin subunit (NCBI)
no
0.35
11
b1177
ycgJ
hypothetical protein (NCBI)
0.36
0.35
12
b4333
yjiK
conserved protein (RefSeq)
no
0.34
13
b3136
agaS
tagatose-6-phosphate ketose/aldose isomerase (NCBI)
no
0.34
14
b1151
ymfO
e14 prophage; conserved protein (RefSeq)
no
0.33
15
b0347
mhpA
3-(3-hydroxyphenyl)propionate hydroxylase (NCBI)
no
0.33
16
b0601
ybdM
hypothetical protein (NCBI)
no
0.32
17
b0389
yaiA
hypothetical protein (NCBI)
no
0.32
18
b1710
btuE
predicted glutathione peroxidase (NCBI)
no
0.32
19
b3145
yraK
predicted fimbrial-like adhesin protein (NCBI)
no
0.31
20
b4686
yshB
expressed protein (RefSeq)
no
0.31
Or look for
negative cofitness