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  • Top cofit genes for b1056 from Escherichia coli BW25113

    yceI: hypothetical protein (NCBI)
    SEED: Protein yceI precursor

    Rank Hit Name Description Conserved? Cofitness  
    1 b1963 b1963 orf, hypothetical protein (VIMSS) no 0.44
    2 b1444 ydcW medium chain aldehyde dehydrogenase (NCBI) no 0.40
    3 b0101 yacG zinc-binding protein (NCBI) no 0.39
    4 b4697 yrdF no description no 0.38
    5 b1635 gst glutathionine S-transferase (NCBI) 0.37 0.37
    6 b3360 pabA para-aminobenzoate synthase component II (NCBI) 0.49 0.37
    7 b2456 cchB predicted carboxysome structural protein, ethanolamine utilization protein (NCBI) no 0.37
    8 b1999 yeeP putative histone (VIMSS) no 0.37
    9 b0251 yafY CP4-6 prophage; predicted DNA-binding transcriptional regulator (RefSeq) no 0.37
    10 b2540 hcaC 3-phenylpropionate dioxygenase, predicted ferredoxin subunit (NCBI) no 0.35
    11 b1177 ycgJ hypothetical protein (NCBI) 0.36 0.35
    12 b4333 yjiK conserved protein (RefSeq) no 0.34
    13 b3136 agaS tagatose-6-phosphate ketose/aldose isomerase (NCBI) no 0.34
    14 b1151 ymfO e14 prophage; conserved protein (RefSeq) no 0.33
    15 b0347 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase (NCBI) no 0.33
    16 b0601 ybdM hypothetical protein (NCBI) no 0.32
    17 b0389 yaiA hypothetical protein (NCBI) no 0.32
    18 b1710 btuE predicted glutathione peroxidase (NCBI) no 0.32
    19 b3145 yraK predicted fimbrial-like adhesin protein (NCBI) no 0.31
    20 b4686 yshB expressed protein (RefSeq) no 0.31

    Or look for negative cofitness