Top cofit genes for b1010 from Escherichia coli BW25113

ycdK: hypothetical protein (NCBI)
KEGG: UPF0076 protein RutC

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b4231	yjfF	putative transport system permease protein (VIMSS)	0.50	0.20
2	b1887	cheW	purine-binding chemotaxis protein (NCBI)	no	0.20
3	b1653	lhr	predicted ATP-dependent helicase (NCBI)	no	0.19
4	b1468	narZ	nitrate reductase 2 (NRZ), alpha subunit (NCBI)	no	0.18
5	b2961	mutY	adenine DNA glycosylase (NCBI)	0.22	0.18
6	b1801	yeaV	predicted transporter (NCBI)	no	0.18
7	b4170	mutL	DNA mismatch repair protein (NCBI)	0.57	0.17
8	b2700	ygaD	competence damage-inducible protein A (NCBI)	no	0.17
9	b2140	dusC	tRNA-dihydrouridine synthase C (NCBI)	no	0.17
10	b3422	rtcR	sigma 54-dependent transcriptional regulator of rtcBA expression (NCBI)	no	0.17
11	b1879	flhA	flagellar biosynthesis protein A (NCBI)	no	0.17
12	b0118	acnB	aconitate hydratase (NCBI)	no	0.17
13	b2093	gatB	galactitol-specific enzyme IIB component of PTS (NCBI)	no	0.16
14	b2681	ygaY	predicted transporter (pseudogene) (RefSeq)	no	0.16
15	b1880	flhB	flagellar biosynthesis protein B (NCBI)	no	0.16
16	b0134	panB	3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI)	no	0.16
17	b0066	thiQ	thiamin transporter subunit (NCBI)	no	0.16
18	b4582	yoeA	no description	no	0.16
19	b4213	cpdB	bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (NCBI)	0.26	0.16
20	b3578	yiaN	predicted transporter (NCBI)	no	0.16

Or look for negative cofitness