Top cofit genes for b0560 from Escherichia coli BW25113

nohB: DLP12 prophage; DNA packaging protein (NCBI)
SEED: Terminase small subunit

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b3207	yrbL	hypothetical protein (NCBI)	no	0.22
2	b4238	nrdD	anaerobic ribonucleoside triphosphate reductase (NCBI)	no	0.22
3	b4288	fecD	KpLE2 phage-like element; iron-dicitrate transporter subunit (NCBI)	no	0.21
4	b4237	nrdG	anaerobic ribonucleotide reductase activating protein (NCBI)	no	0.21
5	b0950	pqiA	paraquat-inducible membrane protein A (NCBI)	no	0.21
6	b4271	intB	KpLE2 phage-like element; predicted integrase (RefSeq)	no	0.20
7	b3501	arsR	DNA-binding transcriptional repressor (NCBI)	no	0.20
8	b0952	ymbA	conserved protein (RefSeq)	no	0.20
9	b2001	b2001	orf, hypothetical protein (VIMSS)	no	0.20
10	b2174	b2174	orf, hypothetical protein (VIMSS)	no	0.19
11	b2558	mltF	predicted periplasmic binding protein/transglycosylase (RefSeq)	no	0.19
12	b0038	caiB	crotonobetainyl-CoA:carnitineCoA-transferase (NCBI)	no	0.18
13	b3363	ppiA	peptidyl-prolyl cis-trans isomerase A (rotamase A) (NCBI)	no	0.18
14	b0814	ompX	outer membrane protein X (NCBI)	no	0.18
15	b3561	yiaH	conserved inner membrane protein (NCBI)	no	0.17
16	b1358	ydaT	Rac prophage; predicted protein (NCBI)	0.45	0.17
17	b1295	ymjA	hypothetical protein (NCBI)	0.50	0.17
18	b2972	b2972	putative peptidase (VIMSS)	no	0.17
19	b3143	yraI	predicted periplasmic pilin chaperone (NCBI)	no	0.17
20	b1126	potA	putrescine/spermidine ABC transporter ATPase protein (NCBI)	no	0.17

Or look for negative cofitness