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  • Top cofit genes for b0531 from Escherichia coli BW25113

    sfmC: pilin chaperone, periplasmic (NCBI)
    SEED: Fimbrial periplasmic chaperone SfmC
    KEGG: fimbrial chaperone protein

    Rank Hit Name Description Conserved? Cofitness  
    1 b4590 ybfK hypothetical protein (RefSeq) no 0.61
    2 b2847 yqeI predicted transcriptional regulator (NCBI) no 0.61
    3 b0326 yahL hypothetical protein (NCBI) no 0.61
    4 b1409 ynbB predicted CDP-diglyceride synthase (NCBI) no 0.60
    5 b4279 yjhB putative transport protein (VIMSS) 0.33 0.60
    6 b1497 b1497 putative enzyme (VIMSS) no 0.59
    7 b1690 ydiM predicted transporter (NCBI) no 0.59
    8 b0603 ybdO predicted DNA-binding transcriptional regulator (NCBI) 0.56 0.58
    9 b0279 yagM CP4-6 prophage; predicted protein (NCBI) no 0.58
    10 b1407 ydbD orf, hypothetical protein (VIMSS) no 0.58
    11 b2055 wcaE predicted glycosyl transferase (NCBI) no 0.57
    12 b0136 yadK predicted fimbrial-like adhesin protein (NCBI) no 0.57
    13 b4346 mcrB component of McrBC 5-methylcytosine restriction system (VIMSS) no 0.57
    14 b4497 yeeL no description no 0.57
    15 b4462 ygaQ hypothetical protein (RefSeq) no 0.56
    16 b1576 ydfD Qin prophage; predicted protein (NCBI) no 0.56
    17 b1363 trkG Rac prophage; potassium transporter subunit (NCBI) no 0.55
    18 b1968 yedV predicted sensory kinase in two-component regulatory system with YedW (NCBI) no 0.55
    19 b2625 yfjI CP4-57 prophage; predicted protein (NCBI) no 0.55
    20 b1001 yccE hypothetical protein (NCBI) 0.54 0.55

    Or look for negative cofitness