Top cofit genes for b0392 from Escherichia coli BW25113

ykiA: hypothetical protein (NCBI)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b2741	rpoS	RNA polymerase sigma factor (NCBI)	no	0.50
2	b0240	crl	DNA-binding transcriptional regulator (NCBI)	no	0.46
3	b0382	yaiB	hypothetical protein (NCBI)	no	0.45
4	b4071	nrfB	formate-dependent nitrite reductase; a penta-haeme cytochrome c (VIMSS)	no	0.43
5	b2229	b2229	orf, hypothetical protein (VIMSS)	no	0.42
6	b1725	yniA	predicted phosphotransferase/kinase (NCBI)	no	0.42
7	b3753	rbsR	DNA-binding transcriptional repressor of ribose metabolism (NCBI)	no	0.40
8	b2944	sprT	hypothetical protein (NCBI)	no	0.38
9	b1422	ydcI	putative transcriptional regulator LYSR-type (VIMSS)	no	0.37
10	b3929	rraA	ribonuclease activity regulator protein RraA (NCBI)	no	0.35
11	b0503	ybbB	tRNA 2-selenouridine synthase, selenophosphate-dependent (NCBI)	no	0.35
12	b2644	yfjY	CP4-57 prophage; predicted DNA repair protein (NCBI)	no	0.35
13	b3881	yihT	predicted aldolase (NCBI)	no	0.34
14	b3752	rbsK	ribokinase (NCBI)	no	0.34
15	b1743	spy	envelope stress induced periplasmic protein (NCBI)	no	0.34
16	b2602	yfiL	orf, hypothetical protein (VIMSS)	no	0.33
17	b3331	gspJ	predicted general secretory pathway component, cryptic (NCBI)	no	0.33
18	b1823	cspC	stress protein, member of the CspA-family (NCBI)	no	0.33
19	b1824	yobF	hypothetical protein (NCBI)	no	0.32
20	b2199	ccmC	heme exporter subunit (NCBI)	no	0.32

Or look for negative cofitness