Top cofit genes for b0311 from Escherichia coli BW25113

betA: choline dehydrogenase (NCBI)
SEED: Choline dehydrogenase (EC 1.1.99.1)
KEGG: choline dehydrogenase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b1444	ydcW	medium chain aldehyde dehydrogenase (NCBI)	no	0.24
2	b2520	yfhM	hypothetical protein (NCBI)	0.57	0.21
3	b2260	menE	O-succinylbenzoic acid--CoA ligase (NCBI)	no	0.19
4	b4377	yjjU	predicted esterase (NCBI)	no	0.18
5	b0860	artJ	arginine transporter subunit (NCBI)	no	0.18
6	b0324	yahJ	deaminase (NCBI)	0.36	0.18
7	b3494	yhiO	universal stress protein UspB (NCBI)	no	0.18
8	b3208	mtgA	monofunctional biosynthetic peptidoglycan transglycosylase (NCBI)	no	0.18
9	b3666	uhpT	sugar phosphate antiporter (NCBI)	0.36	0.18
10	b4286	yjhV	KpLE2 phage-like element; predicted protein (RefSeq)	no	0.17
11	b1805	fadD	acyl-CoA synthase (NCBI)	no	0.17
12	b0693	speF	ornithine decarboxylase isozyme, inducible (NCBI)	no	0.17
13	b0521	ybcF	predicted carbamate kinase (NCBI)	0.57	0.17
14	b0155	clcA	chloride channel protein (NCBI)	no	0.17
15	b4265	idnT	L-idonate and D-gluconate transporter (NCBI)	no	0.17
16	b2383	ypdD	fused predicted PTS enzymes: Hpr component/enzyme I component/enzyme IIA component (NCBI)	no	0.17
17	b1590	ynfH	oxidoreductase, membrane subunit (NCBI)	no	0.17
18	b1897	otsB	trehalose-6-phosphate phosphatase, biosynthetic (NCBI)	0.53	0.17
19	b1832	yebR	free methionine-(R)-sulfoxide reductase (RefSeq)	no	0.16
20	b4198	ulaF	L-ribulose 5-phosphate 4-epimerase (NCBI)	no	0.16

Or look for negative cofitness