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  • Top cofit genes for b0306 from Escherichia coli BW25113

    ykgE: predicted oxidoreductase (NCBI)
    SEED: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE

    Rank Hit Name Description Conserved? Cofitness  
    1 b3647 yicF putative enzyme (VIMSS) no 0.22
    2 b1473 yddG predicted methyl viologen efflux pump (RefSeq) no 0.19
    3 b4486 yjiV conserved protein (pseudogene) (RefSeq) no 0.18
    4 b1982 amn AMP nucleosidase (NCBI) no 0.17
    5 b1781 yeaE predicted oxidoreductase (NCBI) no 0.17
    6 b4565 sgcB predicted enzyme IIB component of PTS (NCBI) no 0.16
    7 b1780 yeaD orf, hypothetical protein (VIMSS) no 0.16
    8 b3227 dcuD predicted transporter (NCBI) no 0.16
    9 b2096 gatY tagatose-bisphosphate aldolase 1 (VIMSS) no 0.16
    10 b4339 yjiP predicted transposase (RefSeq) no 0.16
    11 b4326 yjiD orf, hypothetical protein (VIMSS) no 0.16
    12 b4265 idnT L-idonate and D-gluconate transporter (NCBI) no 0.16
    13 b1519 tam trans-aconitate 2-methyltransferase (NCBI) 0.33 0.16
    14 b0551 ybcQ DLP12 prophage; predicted antitermination protein (NCBI) no 0.15
    15 b2663 gabP gamma-aminobutyrate transporter (NCBI) no 0.15
    16 b1581 rspA predicted dehydratase (NCBI) no 0.15
    17 b4286 yjhV KpLE2 phage-like element; predicted protein (RefSeq) no 0.15
    18 b4309 yjhS hypothetical protein (NCBI) no 0.15
    19 b3549 tag 3-methyl-adenine DNA glycosylase I, constitutive (NCBI) no 0.15
    20 b3484 yhhI predicted transposase (NCBI) no 0.15

    Or look for negative cofitness