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  • Top cofit genes for b0246 from Escherichia coli BW25113

    yafW: CP4-6 prophage; antitoxin of the YkfI-YafW toxin-antitoxin system (NCBI)
    SEED: YfjZ protein (antitoxin to YpjF)

    Rank Hit Name Description Conserved? Cofitness  
    1 b0266 yagB orf, hypothetical protein (VIMSS) no 0.23
    2 b1594 dgsA DNA-binding transcriptional repressor (NCBI) no 0.23
    3 b2952 yggT predicted inner membrane protein (NCBI) no 0.22
    4 b3326 gspE general secretory pathway component, cryptic (NCBI) no 0.21
    5 b4137 cutA copper binding protein, copper sensitivity (NCBI) no 0.21
    6 b1255 yciC hypothetical protein (NCBI) no 0.21
    7 b3038 ygiC predicted enzyme (NCBI) no 0.21
    8 b4527 b1354 orf, hypothetical protein (VIMSS) no 0.20
    9 b0418 pgpA phosphatidylglycerophosphatase A (NCBI) no 0.20
    10 b2869 ygeV predicted DNA-binding transcriptional regulator (NCBI) no 0.20
    11 b4075 nrfF heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF (NCBI) no 0.20
    12 b4353 yjiX hypothetical protein (NCBI) no 0.19
    13 b0064 araC DNA-binding transcriptional dual regulator (NCBI) no 0.19
    14 b1251 yciI orf, hypothetical protein (VIMSS) no 0.19
    15 b2301 yfcF predicted enzyme (NCBI) no 0.19
    16 b0480 ushA UDP-sugar hydrolase (NCBI) no 0.19
    17 b4364 yjjP putative structural protein (VIMSS) no 0.19
    18 b2775 yqcE predicted transporter (NCBI) no 0.18
    19 b2365 dsdX predicted transporter (NCBI) no 0.18
    20 b2364 dsdC DNA-binding transcriptional dual regulator (NCBI) no 0.18

    Or look for negative cofitness