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  • Top cofit genes for b0221 from Escherichia coli BW25113

    yafH: putative acyl-CoA dehydrogenase (EC 1.3.99.-) (VIMSS)
    SEED: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
    KEGG: acyl-CoA dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 b4467 glcF glycolate oxidase iron-sulfur subunit (NCBI) 0.48 0.33
    2 b1854 pykA pyruvate kinase (NCBI) 0.90 0.33
    3 b0507 gcl glyoxylate carboligase (NCBI) no 0.32
    4 b4020 yjbB predicted transporter (NCBI) no 0.31
    5 b0162 yaeG orf, hypothetical protein (VIMSS) 0.15 0.31
    6 b2980 glcC DNA-binding transcriptional dual regulator, glycolate-binding (NCBI) no 0.31
    7 b3355 prkB predicted phosphoribulokinase (NCBI) 0.61 0.30
    8 b2979 glcD glycolate dehydrogenase, putative FAD-linked subunit (from data) no 0.30
    9 b3360 pabA para-aminobenzoate synthase component II (NCBI) 0.45 0.27
    10 b4256 yjgM predicted acetyltransferase (NCBI) no 0.26
    11 b1235 rssB response regulator of RpoS (NCBI) 0.59 0.26
    12 b3845 fadA acetyl-CoA acetyltransferase (NCBI) 0.71 0.26
    13 b4190 yjfP predicted hydrolase (NCBI) no 0.25
    14 b3993 thiE thiamine-phosphate pyrophosphorylase (NCBI) 0.69 0.25
    15 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) 0.71 0.25
    16 b4702 mgtL regulatory leader peptide for mgtA (NCBI) no 0.25
    17 b4260 pepA leucyl aminopeptidase (NCBI) 0.89 0.25
    18 b2113 mrp putative ATPase (VIMSS) no 0.24
    19 b3992 thiF thiamin biosynthesis, thiazole moiety (VIMSS) 0.64 0.24
    20 b3124 garK glycerate kinase I (RefSeq) 0.78 0.24

    Or look for negative cofitness