Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS22410

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,655,600	+		DDA3937_RS15985	0.64	+0.4
3,655,687	+		DDA3937_RS15985	0.80	+0.4
3,655,687	+		DDA3937_RS15985	0.80	-0.9
3,655,688	-				-0.2
3,655,772	-				+0.6
3,655,783	+				+1.4
3,655,783	+				-0.8
3,655,783	+				-0.3
3,655,783	+				+0.4
3,655,784	-				-0.4
3,655,784	-				-2.5
3,655,784	-				-0.5
3,655,784	-				-0.0
3,655,796	-				-0.0
3,655,844	+				-0.6
3,655,858	+				+0.4
3,655,858	+				+0.4
3,655,858	+				+1.4
3,655,859	-				-0.6
3,655,859	-				+1.7
3,655,859	-				+1.0
3,655,859	-				+2.4
3,655,898	+				-0.8
3,655,898	+				-1.0
3,655,898	+				-0.6
3,655,899	-				-0.0
3,655,899	-				-1.3
3,655,899	-				+2.1
3,655,899	-				-0.6
3,655,900	+				+0.1
3,655,900	+				+0.2
3,655,953	-				-0.5
3,655,964	+				+0.4
3,655,964	+				-1.6
3,655,965	-				-0.4
3,655,965	-				+0.1
3,655,965	-				-1.1
3,655,965	-				+0.0
3,655,965	-				+0.3
3,655,984	+				+2.0
3,655,984	+				+1.7
3,655,984	+				-0.4
3,655,984	+				+2.4
3,655,984	+				-0.8
3,655,984	+				-1.3
3,655,984	+				-1.6
3,655,985	-				-0.7
3,655,985	-				+0.1
3,655,985	-				-1.7
3,655,985	-				-2.2
3,655,985	-				-0.5
3,655,985	-				-0.4
3,655,986	+				-0.8
3,655,987	-				+0.0
3,655,987	-				+0.1
3,656,093	+		DDA3937_RS15990	0.33	+0.2
3,656,115	-		DDA3937_RS15990	0.38	-1.1
3,656,167	+		DDA3937_RS15990	0.50	-0.0
3,656,168	-		DDA3937_RS15990	0.50	+0.6
3,656,182	+		DDA3937_RS15990	0.53	+0.2
3,656,242	-		DDA3937_RS15990	0.66	+0.4
3,656,251	-		DDA3937_RS15990	0.68	+0.2
3,656,314	+		DDA3937_RS15990	0.82	+0.3
3,656,314	+		DDA3937_RS15990	0.82	-0.4
3,656,314	+		DDA3937_RS15990	0.82	-0.9
3,656,314	+		DDA3937_RS15990	0.82	-0.1
3,656,315	-		DDA3937_RS15990	0.82	-1.6
3,656,317	+		DDA3937_RS15990	0.83	-0.0
3,656,358	+				-0.9
3,656,358	+				+0.6
3,656,359	-				-1.0
3,656,359	-				+0.1
3,656,437	-				-0.2
3,656,437	-				+4.0
3,656,546	+				+0.7
3,656,547	-				-1.7
3,656,547	-				-1.0
3,656,547	-				+0.6
3,656,547	-				-0.5
3,656,677	+		DDA3937_RS22410	0.37	+0.6
3,656,677	+		DDA3937_RS22410	0.37	-0.4
3,656,678	-		DDA3937_RS22410	0.37	-0.6
3,656,678	-		DDA3937_RS22410	0.37	-2.2
3,656,731	+		DDA3937_RS22410	0.53	+0.6
3,656,742	+		DDA3937_RS22410	0.56	-0.2
3,656,743	-		DDA3937_RS22410	0.56	+0.0
3,656,755	+		DDA3937_RS22410	0.60	-0.5
3,656,755	+		DDA3937_RS22410	0.60	-0.6
3,656,756	-		DDA3937_RS22410	0.60	-0.5
3,656,786	+				+0.4
3,656,787	-		DDA3937_RS22410	0.69	+3.2
3,656,787	-		DDA3937_RS22410	0.69	-1.1
3,656,804	-		DDA3937_RS22410	0.74	+0.3
3,656,819	+		DDA3937_RS22410	0.79	-0.5
3,656,819	+		DDA3937_RS22410	0.79	+1.2
3,656,826	+		DDA3937_RS22410	0.81	-0.5
3,656,826	+		DDA3937_RS22410	0.81	+5.7
3,656,827	-		DDA3937_RS22410	0.81	-0.5
3,656,846	-		DDA3937_RS22410	0.87	-2.3
3,656,889	+				-0.4
3,656,889	+				-2.0
3,656,889	+				-0.6
3,656,890	-				-0.3
3,656,890	-				+0.8
3,656,890	-				-0.3
3,656,890	-				+0.4
3,656,890	-				-0.0
3,656,890	-				+0.1
3,656,897	+				-0.2
3,656,897	+				+0.6
3,656,897	+				+0.5
3,656,897	+				+0.9
3,656,897	+				-1.7
3,656,897	+				-0.4
3,656,897	+				+1.0
3,656,897	+				+0.8
3,656,897	+				+0.1
3,656,897	+				-2.1
3,656,897	+				-0.1
3,656,897	+				+0.4
3,656,897	+				-1.4
3,656,897	+				+0.4
3,656,897	+				+1.4
3,656,897	+				-1.6
3,656,897	+				-0.2
3,656,897	+				+1.1
3,656,897	+				+0.4
3,656,897	+				-0.2
3,656,897	+				-1.2
3,656,897	+				+1.0
3,656,897	+				-1.2
3,656,897	+				-1.3
3,656,898	-				+0.7
3,656,898	-				+1.4
3,656,898	-				+0.2
3,656,898	-				-1.4
3,656,898	-				-0.9
3,656,898	-				+0.5
3,656,898	-				-0.6
3,656,898	-				+0.2
3,656,898	-				+0.3
3,656,898	-				+0.5
3,656,898	-				-0.9
3,656,898	-				-0.1
3,656,898	-				-0.1
3,656,898	-				+1.7
3,656,898	-				-0.6
3,656,898	-				+0.2
3,656,898	-				+1.1
3,656,901	+				-1.6
3,656,901	+				-0.4
3,656,901	+				-0.5
3,656,901	+				+0.7
3,656,901	+				-0.6
3,656,901	+				-0.5
3,656,902	-				+0.6
3,656,902	-				+0.1
3,656,902	-				+0.8
3,656,902	-				-0.2
3,656,929	+				-2.3
3,656,929	+				-1.0
3,656,957	+				-1.7
3,656,958	-				-1.5
3,656,975	+				-0.7
3,656,976	-				+0.1
3,656,976	-				-0.2
3,656,976	-				-0.5
3,656,978	+				-2.1
3,656,978	+				-0.0
3,656,979	-				+1.0
3,656,979	-				+1.1
3,656,979	-				+1.0
3,656,992	+				+2.4
3,656,992	+				-0.7
3,656,992	+				+0.4
3,657,025	+				-0.4
3,657,039	+				+1.2
3,657,039	+				-1.4
3,657,039	+				-0.2
3,657,040	-				-1.7
3,657,084	-				+0.2
3,657,084	-				+0.4
3,657,182	+		DDA3937_RS15995	0.15	-1.4
3,657,183	-		DDA3937_RS15995	0.15	-1.5
3,657,202	-		DDA3937_RS15995	0.17	-0.0
3,657,202	-		DDA3937_RS15995	0.17	-1.5
3,657,262	+		DDA3937_RS15995	0.22	+1.0
3,657,263	-		DDA3937_RS15995	0.22	-2.4
3,657,263	-		DDA3937_RS15995	0.22	-0.4
3,657,263	-		DDA3937_RS15995	0.22	-1.3
3,657,358	+		DDA3937_RS15995	0.31	+1.4
3,657,358	+		DDA3937_RS15995	0.31	-1.2
3,657,358	+		DDA3937_RS15995	0.31	+0.4
3,657,359	-		DDA3937_RS15995	0.31	-0.9
3,657,359	-		DDA3937_RS15995	0.31	+0.4
3,657,359	-		DDA3937_RS15995	0.31	-0.9
3,657,359	-		DDA3937_RS15995	0.31	-1.2
3,657,366	-		DDA3937_RS15995	0.32	-0.9
3,657,375	-		DDA3937_RS15995	0.33	-0.1
3,657,384	+		DDA3937_RS15995	0.34	-0.6
3,657,384	+		DDA3937_RS15995	0.34	-0.1
3,657,385	-		DDA3937_RS15995	0.34	-0.2
3,657,388	+		DDA3937_RS15995	0.34	-1.6
3,657,388	+		DDA3937_RS15995	0.34	-1.4
3,657,389	-		DDA3937_RS15995	0.34	-1.3
3,657,407	-		DDA3937_RS15995	0.36	-0.5
3,657,410	-		DDA3937_RS15995	0.36	+0.4
3,657,546	+		DDA3937_RS15995	0.49	+1.0
3,657,546	+		DDA3937_RS15995	0.49	+0.4
3,657,610	-		DDA3937_RS15995	0.55	-0.6