Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13185

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,005,377	-				-1.8
3,005,393	-				-0.1
3,005,415	-				-0.8
3,005,415	-				-0.5
3,005,415	-				-0.7
3,005,415	-				-0.6
3,005,434	+				-0.4
3,005,486	-				+0.3
3,005,503	+				-0.4
3,005,515	+				-0.4
3,005,516	-				-1.0
3,005,516	-				-0.6
3,005,540	-				-0.4
3,005,540	-				+1.1
3,005,576	+				+0.5
3,005,577	-				-0.8
3,005,604	+				+0.1
3,005,604	+				-2.0
3,005,604	+				+1.4
3,005,605	-				-0.4
3,005,605	-				-1.1
3,005,605	-				-0.1
3,005,605	-				-0.6
3,005,606	+				-1.6
3,005,606	+				-1.5
3,005,606	+				-2.0
3,005,607	-				-1.0
3,005,607	-				-1.5
3,005,607	-				+1.2
3,005,612	+				-0.8
3,005,623	+				+1.4
3,005,623	+				-1.0
3,005,624	-				-1.4
3,005,637	+				+0.8
3,005,638	-				-1.3
3,005,664	+				+0.8
3,005,665	-				-0.3
3,005,665	-				-1.4
3,005,669	-				+1.2
3,005,669	-				-0.3
3,005,669	-				+1.8
3,005,683	-				-3.6
3,005,686	+				-1.8
3,005,686	+				-1.5
3,005,687	-				+1.6
3,005,687	-				-1.1
3,005,687	-				+5.0
3,005,756	+		DDA3937_RS13180	0.27	-1.7
3,005,756	+		DDA3937_RS13180	0.27	-1.8
3,005,756	+		DDA3937_RS13180	0.27	-0.4
3,005,757	-		DDA3937_RS13180	0.27	-1.6
3,005,757	-		DDA3937_RS13180	0.27	-0.2
3,005,783	+		DDA3937_RS13180	0.38	-0.9
3,005,791	+		DDA3937_RS13180	0.41	+0.4
3,005,791	+		DDA3937_RS13180	0.41	-0.8
3,005,791	+		DDA3937_RS13180	0.41	+0.1
3,005,792	-		DDA3937_RS13180	0.41	-1.4
3,005,836	-		DDA3937_RS13180	0.58	+0.1
3,005,836	-		DDA3937_RS13180	0.58	-1.8
3,005,866	+		DDA3937_RS13180	0.70	-0.9
3,005,866	+		DDA3937_RS13180	0.70	-1.4
3,005,866	+		DDA3937_RS13180	0.70	+0.6
3,005,867	-		DDA3937_RS13180	0.71	+0.6
3,005,867	-		DDA3937_RS13180	0.71	+0.2
3,005,867	-		DDA3937_RS13180	0.71	+1.2
3,005,867	-		DDA3937_RS13180	0.71	+1.0
3,005,867	-		DDA3937_RS13180	0.71	-0.2
3,005,867	-		DDA3937_RS13180	0.71	+2.6
3,005,867	-		DDA3937_RS13180	0.71	+0.2
3,005,867	-		DDA3937_RS13180	0.71	-0.4
3,005,867	-		DDA3937_RS13180	0.71	+0.2
3,005,978	-				-0.2
3,006,012	+				-0.8
3,006,012	+				-1.1
3,006,020	-				+0.2
3,006,020	-				-0.1
3,006,222	-				+0.0
3,006,240	-				-0.4
3,006,240	-				-1.1
3,006,332	+				-0.3
3,006,336	-				-1.2
3,006,349	-				-1.4
3,006,349	-				-0.4
3,006,365	-				-1.4
3,006,394	+		DDA3937_RS13185	0.13	-0.3
3,006,395	-		DDA3937_RS13185	0.13	-0.4
3,006,395	-		DDA3937_RS13185	0.13	+5.0
3,006,395	-		DDA3937_RS13185	0.13	-0.4
3,006,396	+		DDA3937_RS13185	0.14	+0.2
3,006,396	+		DDA3937_RS13185	0.14	-1.3
3,006,397	-		DDA3937_RS13185	0.14	+4.3
3,006,397	-		DDA3937_RS13185	0.14	-0.4
3,006,397	-		DDA3937_RS13185	0.14	-0.8
3,006,397	-		DDA3937_RS13185	0.14	+0.4
3,006,397	-		DDA3937_RS13185	0.14	-0.4
3,006,397	-		DDA3937_RS13185	0.14	-0.1
3,006,413	-		DDA3937_RS13185	0.17	-0.1
3,006,418	+				+0.6
3,006,441	+		DDA3937_RS13185	0.22	-0.4
3,006,442	-		DDA3937_RS13185	0.22	+1.3
3,006,477	-		DDA3937_RS13185	0.28	-0.1
3,006,477	-				+0.6
3,006,490	+		DDA3937_RS13185	0.30	+0.0
3,006,490	+		DDA3937_RS13185	0.30	+0.8
3,006,490	+		DDA3937_RS13185	0.30	-1.1
3,006,491	-		DDA3937_RS13185	0.31	-1.1
3,006,491	-		DDA3937_RS13185	0.31	-0.7
3,006,491	-		DDA3937_RS13185	0.31	-0.4
3,006,581	+		DDA3937_RS13185	0.47	-0.3
3,006,581	+		DDA3937_RS13185	0.47	+0.2
3,006,582	-		DDA3937_RS13185	0.47	+0.7
3,006,582	-		DDA3937_RS13185	0.47	-1.6
3,006,602	+		DDA3937_RS13185	0.51	+0.2
3,006,602	+		DDA3937_RS13185	0.51	+1.4
3,006,603	-		DDA3937_RS13185	0.51	+1.9
3,006,604	+		DDA3937_RS13185	0.51	-0.8
3,006,604	+		DDA3937_RS13185	0.51	+0.3
3,006,604	+		DDA3937_RS13185	0.51	-0.4
3,006,604	+		DDA3937_RS13185	0.51	-1.4
3,006,605	-		DDA3937_RS13185	0.51	-1.3
3,006,605	-		DDA3937_RS13185	0.51	+5.7
3,006,605	-		DDA3937_RS13185	0.51	+0.5
3,006,605	-		DDA3937_RS13185	0.51	-0.7
3,006,613	-		DDA3937_RS13185	0.53	+0.8
3,006,622	+		DDA3937_RS13185	0.54	+0.2
3,006,639	-		DDA3937_RS13185	0.57	+0.2
3,006,760	-		DDA3937_RS13185	0.79	-0.9
3,006,760	-		DDA3937_RS13185	0.79	-1.3
3,006,812	+		DDA3937_RS13185	0.88	-0.4
3,006,812	+		DDA3937_RS13185	0.88	+1.8
3,006,813	-		DDA3937_RS13185	0.89	-0.6
3,006,844	+				-2.3
3,006,844	+				+0.2
3,006,845	-				+0.8
3,006,873	+				-0.5
3,006,873	+				-1.1
3,006,889	+				-1.3
3,006,899	+				+1.4
3,006,909	+				+1.2
3,006,909	+				+0.4
3,006,910	-				-0.6
3,007,050	-		DDA3937_RS13190	0.25	+0.3
3,007,050	-		DDA3937_RS13190	0.25	+0.0
3,007,052	-		DDA3937_RS13190	0.26	+0.2
3,007,057	-		DDA3937_RS13190	0.26	-0.6
3,007,057	-		DDA3937_RS13190	0.26	+2.8
3,007,134	+		DDA3937_RS13190	0.40	-0.5
3,007,135	-		DDA3937_RS13190	0.40	-0.3
3,007,176	+		DDA3937_RS13190	0.47	-1.1
3,007,176	+		DDA3937_RS13190	0.47	+0.6
3,007,176	+		DDA3937_RS13190	0.47	-1.5
3,007,177	-		DDA3937_RS13190	0.47	+0.8
3,007,177	-		DDA3937_RS13190	0.47	+0.9
3,007,287	-				+0.2
3,007,287	-		DDA3937_RS13190	0.66	-1.4
3,007,287	-		DDA3937_RS13190	0.66	-1.1
3,007,287	-		DDA3937_RS13190	0.66	+2.4
3,007,299	+		DDA3937_RS13190	0.68	-1.2
3,007,404	+		DDA3937_RS13190	0.86	+1.2
3,007,407	+		DDA3937_RS13190	0.87	-0.9
3,007,484	-				-1.2
3,007,503	+				-0.8
3,007,503	+				+0.3
3,007,721	+		DDA3937_RS13195	0.18	-0.6
3,007,729	-		DDA3937_RS13195	0.19	-0.7
3,007,729	-		DDA3937_RS13195	0.19	-0.9
3,007,729	-		DDA3937_RS13195	0.19	-2.0
3,007,729	-		DDA3937_RS13195	0.19	+0.2
3,007,729	-		DDA3937_RS13195	0.19	+1.1