Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09905

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,238,462	+		DDA3937_RS09900	0.33	-1.7
2,238,462	+		DDA3937_RS09900	0.33	+0.5
2,238,463	-		DDA3937_RS09900	0.33	-0.6
2,238,463	-		DDA3937_RS09900	0.33	+0.4
2,238,463	-		DDA3937_RS09900	0.33	-2.2
2,238,463	-		DDA3937_RS09900	0.33	-1.5
2,238,495	+		DDA3937_RS09900	0.36	+0.1
2,238,496	-		DDA3937_RS09900	0.36	-0.1
2,238,502	+		DDA3937_RS09900	0.36	-0.2
2,238,502	+		DDA3937_RS09900	0.36	+0.2
2,238,503	-		DDA3937_RS09900	0.36	+1.3
2,238,503	-				-1.2
2,238,503	-		DDA3937_RS09900	0.36	-0.6
2,238,503	-		DDA3937_RS09900	0.36	-0.2
2,238,537	-		DDA3937_RS09900	0.39	+0.5
2,238,537	-		DDA3937_RS09900	0.39	+3.7
2,238,543	+		DDA3937_RS09900	0.39	-0.6
2,238,543	+		DDA3937_RS09900	0.39	+0.1
2,238,543	+		DDA3937_RS09900	0.39	+1.1
2,238,543	+		DDA3937_RS09900	0.39	-0.9
2,238,544	-		DDA3937_RS09900	0.39	-2.1
2,238,547	-		DDA3937_RS09900	0.40	-0.0
2,238,563	+		DDA3937_RS09900	0.41	+2.0
2,238,563	+		DDA3937_RS09900	0.41	-0.6
2,238,564	-		DDA3937_RS09900	0.41	+0.8
2,238,635	-		DDA3937_RS09900	0.46	-1.5
2,238,635	-		DDA3937_RS09900	0.46	-0.4
2,238,635	-		DDA3937_RS09900	0.46	+0.7
2,238,635	-		DDA3937_RS09900	0.46	+0.1
2,238,642	+		DDA3937_RS09900	0.47	-0.2
2,238,643	-		DDA3937_RS09900	0.47	-0.4
2,238,741	-		DDA3937_RS09900	0.54	+0.8
2,238,803	+		DDA3937_RS09900	0.59	-1.1
2,238,810	-		DDA3937_RS09900	0.60	-1.1
2,238,810	-		DDA3937_RS09900	0.60	+1.5
2,238,908	+		DDA3937_RS09900	0.67	+0.8
2,238,948	+		DDA3937_RS09900	0.70	+0.1
2,238,948	+		DDA3937_RS09900	0.70	-0.2
2,238,948	+		DDA3937_RS09900	0.70	-0.2
2,238,948	+		DDA3937_RS09900	0.70	-1.1
2,238,948	+		DDA3937_RS09900	0.70	-1.3
2,238,948	+		DDA3937_RS09900	0.70	+0.7
2,238,949	-		DDA3937_RS09900	0.70	+0.7
2,238,949	-		DDA3937_RS09900	0.70	-0.8
2,238,949	-		DDA3937_RS09900	0.70	-1.0
2,238,949	-		DDA3937_RS09900	0.70	+0.7
2,238,960	+		DDA3937_RS09900	0.71	+0.8
2,239,058	+		DDA3937_RS09900	0.79	-0.7
2,239,089	-		DDA3937_RS09900	0.81	-0.9
2,239,113	+		DDA3937_RS09900	0.83	+1.5
2,239,113	+		DDA3937_RS09900	0.83	+0.3
2,239,113	+		DDA3937_RS09900	0.83	+0.2
2,239,114	-		DDA3937_RS09900	0.83	-0.5
2,239,114	-		DDA3937_RS09900	0.83	+0.3
2,239,114	-		DDA3937_RS09900	0.83	-1.9
2,239,121	+		DDA3937_RS09900	0.83	-0.2
2,239,122	-		DDA3937_RS09900	0.84	-0.6
2,239,163	+		DDA3937_RS09900	0.87	+0.6
2,239,163	+		DDA3937_RS09900	0.87	+0.1
2,239,257	+				+0.1
2,239,257	+				-0.9
2,239,258	-				+0.7
2,239,258	-				-0.3
2,239,258	-				-1.9
2,239,258	-				+0.2
2,239,259	+				-1.1
2,239,259	+				+0.4
2,239,259	+				+0.3
2,239,301	+				+0.9
2,239,302	-				-0.2
2,239,336	-				-0.5
2,239,385	-				-0.2
2,239,431	-				+2.1
2,239,436	+				-1.1
2,239,459	+				-0.7
2,239,477	+				-1.0
2,239,477	+				+1.3
2,239,478	-				+2.1
2,239,478	-				-1.0
2,239,509	+				+0.8
2,239,544	+		DDA3937_RS09905	0.10	+0.3
2,239,544	+		DDA3937_RS09905	0.10	-3.0
2,239,544	+		DDA3937_RS09905	0.10	+1.5
2,239,552	+		DDA3937_RS09905	0.11	+0.4
2,239,581	+		DDA3937_RS09905	0.14	-1.5
2,239,582	-		DDA3937_RS09905	0.14	+0.5
2,239,608	+		DDA3937_RS09905	0.17	+0.8
2,239,609	-		DDA3937_RS09905	0.17	-1.7
2,239,612	+		DDA3937_RS09905	0.17	+0.4
2,239,612	+		DDA3937_RS09905	0.17	-0.1
2,239,612	+		DDA3937_RS09905	0.17	+0.2
2,239,612	+		DDA3937_RS09905	0.17	-0.7
2,239,613	-		DDA3937_RS09905	0.17	-0.7
2,239,613	-				-0.2
2,239,626	+		DDA3937_RS09905	0.18	+1.1
2,239,626	+		DDA3937_RS09905	0.18	-0.1
2,239,626	+		DDA3937_RS09905	0.18	-0.9
2,239,627	-		DDA3937_RS09905	0.18	-0.4
2,239,627	-		DDA3937_RS09905	0.18	-0.4
2,239,629	+		DDA3937_RS09905	0.19	-0.9
2,239,630	-		DDA3937_RS09905	0.19	-1.0
2,239,655	-		DDA3937_RS09905	0.21	-0.0
2,239,817	-		DDA3937_RS09905	0.37	+0.2
2,239,817	-		DDA3937_RS09905	0.37	+0.8
2,239,876	+		DDA3937_RS09905	0.43	+0.3
2,239,876	+		DDA3937_RS09905	0.43	+1.3
2,239,876	+		DDA3937_RS09905	0.43	+8.1
2,239,877	-				+1.1
2,239,926	+		DDA3937_RS09905	0.47	+4.0
2,239,961	-		DDA3937_RS09905	0.51	-0.1
2,240,080	-		DDA3937_RS09905	0.62	+0.5
2,240,269	-		DDA3937_RS09905	0.81	-0.5
2,240,269	-		DDA3937_RS09905	0.81	+0.7
2,240,278	-		DDA3937_RS09905	0.82	+0.5
2,240,342	+		DDA3937_RS09905	0.88	+0.4
2,240,418	-				-0.0
2,240,430	-				+0.2
2,240,482	+				+0.5
2,240,482	+				-0.6
2,240,482	+				-2.6
2,240,482	+				+0.4
2,240,490	-				-0.4
2,240,513	-				-1.4
2,240,522	+				+0.2
2,240,625	+				-0.7
2,240,625	+				-2.0
2,240,664	+				+0.8
2,240,664	+				+0.5
2,240,664	+				+1.5
2,240,664	+				+0.3
2,240,664	+				-1.2
2,240,665	-				-0.3
2,240,665	-				-0.0
2,240,683	+				+0.0
2,240,741	-				+1.1
2,240,753	+				+0.1
2,240,753	+				-1.5
2,240,774	+				-1.9
2,240,774	+				-0.9
2,240,774	+				-1.5
2,240,774	+				-0.6
2,240,774	+				+0.3
2,240,775	-				-2.4
2,240,775	-				+0.4
2,240,775	-				+1.7
2,240,775	-				-0.3
2,240,775	-				-1.4
2,240,775	-				+1.3
2,240,775	-				-1.7
2,240,792	+				-0.3
2,241,053	+		DDA3937_RS09910	0.17	+0.1
2,241,053	+		DDA3937_RS09910	0.17	-0.8
2,241,054	-		DDA3937_RS09910	0.17	-0.1
2,241,206	+		DDA3937_RS09910	0.26	-0.0
2,241,207	-		DDA3937_RS09910	0.26	+0.4
2,241,233	-		DDA3937_RS09910	0.28	-2.1
2,241,370	-		DDA3937_RS09910	0.36	+0.0