Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5687

Experiment: DEANONOate 0.000625 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DEANONOate 0.000625 M
6,500,600	+		Pf6N2E2_5686	0.41	+1.1
6,500,600	+		Pf6N2E2_5686	0.41	+1.0
6,500,600	+		Pf6N2E2_5686	0.41	-0.6
6,500,600	+		Pf6N2E2_5686	0.41	+0.8
6,500,600	+		Pf6N2E2_5686	0.41	+0.8
6,500,600	+		Pf6N2E2_5686	0.41	-0.3
6,500,600	+		Pf6N2E2_5686	0.41	+0.5
6,500,601	-		Pf6N2E2_5686	0.41	+0.9
6,500,601	-		Pf6N2E2_5686	0.41	+1.4
6,500,635	+		Pf6N2E2_5686	0.43	+1.2
6,500,635	+		Pf6N2E2_5686	0.43	+0.8
6,500,659	-		Pf6N2E2_5686	0.45	+0.8
6,500,659	-		Pf6N2E2_5686	0.45	-1.9
6,500,854	+		Pf6N2E2_5686	0.60	-0.2
6,501,229	+		Pf6N2E2_5686	0.88	+0.4
6,501,229	+		Pf6N2E2_5686	0.88	+2.0
6,501,229	+		Pf6N2E2_5686	0.88	-1.4
6,501,229	+		Pf6N2E2_5686	0.88	-1.8
6,501,229	+		Pf6N2E2_5686	0.88	+1.9
6,501,230	-		Pf6N2E2_5686	0.88	-1.1
6,501,230	-		Pf6N2E2_5686	0.88	-2.4
6,501,230	-		Pf6N2E2_5686	0.88	+2.0
6,501,230	-		Pf6N2E2_5686	0.88	+0.1
6,501,230	-		Pf6N2E2_5686	0.88	-0.2
6,501,230	-		Pf6N2E2_5686	0.88	-0.2
6,501,262	+				+0.6
6,501,263	-				-0.2
6,501,308	+				-0.3
6,501,309	-				-2.3
6,501,309	-				+1.7
6,501,309	-				-0.9
6,501,435	-				+0.8
6,501,498	+				+0.8
6,501,499	-				-1.1
6,501,499	-				-0.0
6,501,542	+				-3.8
6,501,542	+				+0.7
6,501,543	-				+2.1
6,501,543	-				+0.7
6,501,543	-				-2.4
6,501,543	-				-2.7
6,501,546	+				-1.3
6,501,546	+				-0.9
6,501,546	+				+0.3
6,501,546	+				-0.1
6,501,547	-				+1.2
6,501,547	-				-1.7
6,501,547	-				-2.1
6,501,547	-				+0.4
6,501,547	-				+1.1
6,501,615	+		Pf6N2E2_5687	0.11	-0.1
6,501,616	-		Pf6N2E2_5687	0.11	+1.1
6,501,685	-		Pf6N2E2_5687	0.16	-3.5
6,501,798	+		Pf6N2E2_5687	0.24	-3.9
6,501,799	-		Pf6N2E2_5687	0.24	-1.4
6,501,799	-		Pf6N2E2_5687	0.24	+0.1
6,501,799	-		Pf6N2E2_5687	0.24	+0.6
6,501,867	+		Pf6N2E2_5687	0.29	-0.5
6,501,867	+		Pf6N2E2_5687	0.29	-1.3
6,501,867	+		Pf6N2E2_5687	0.29	+1.0
6,501,868	-		Pf6N2E2_5687	0.29	-0.9
6,501,868	-		Pf6N2E2_5687	0.29	-0.5
6,501,869	+		Pf6N2E2_5687	0.30	-0.5
6,501,869	+		Pf6N2E2_5687	0.30	-3.2
6,501,869	+		Pf6N2E2_5687	0.30	+1.2
6,501,869	+		Pf6N2E2_5687	0.30	-1.2
6,501,869	+		Pf6N2E2_5687	0.30	-2.0
6,501,869	+		Pf6N2E2_5687	0.30	+0.9
6,501,869	+		Pf6N2E2_5687	0.30	-2.7
6,501,869	+		Pf6N2E2_5687	0.30	+0.9
6,501,870	-		Pf6N2E2_5687	0.30	-0.9
6,501,870	-		Pf6N2E2_5687	0.30	-2.4
6,501,882	+		Pf6N2E2_5687	0.30	+1.3
6,502,079	+		Pf6N2E2_5687	0.45	-0.1
6,502,079	+		Pf6N2E2_5687	0.45	-1.5
6,502,116	+		Pf6N2E2_5687	0.48	+0.7
6,502,117	-		Pf6N2E2_5687	0.48	-2.9
6,502,117	-		Pf6N2E2_5687	0.48	+1.2
6,502,134	+		Pf6N2E2_5687	0.49	-0.1
6,502,134	+		Pf6N2E2_5687	0.49	+0.1
6,502,135	-		Pf6N2E2_5687	0.49	-0.9
6,502,135	-		Pf6N2E2_5687	0.49	-2.6
6,502,135	-		Pf6N2E2_5687	0.49	-1.4
6,502,135	-		Pf6N2E2_5687	0.49	-0.2
6,502,135	-		Pf6N2E2_5687	0.49	-2.6
6,502,135	-		Pf6N2E2_5687	0.49	-1.0
6,502,135	-		Pf6N2E2_5687	0.49	-0.6
6,502,461	+		Pf6N2E2_5687	0.73	+0.8
6,502,461	+		Pf6N2E2_5687	0.73	+0.4
6,502,461	+		Pf6N2E2_5687	0.73	-0.1
6,502,461	+		Pf6N2E2_5687	0.73	-2.8
6,502,462	-				-0.1
6,502,462	-		Pf6N2E2_5687	0.73	-1.8
6,502,462	-		Pf6N2E2_5687	0.73	+0.5
6,502,462	-		Pf6N2E2_5687	0.73	+0.5
6,502,841	+				-0.8
6,502,909	+				+1.6
6,502,942	-				+1.4
6,502,942	-				-0.4
6,502,942	-				+0.4
6,502,994	+		Pf6N2E2_5688	0.13	-0.5
6,502,994	+		Pf6N2E2_5688	0.13	-0.4
6,502,995	-		Pf6N2E2_5688	0.13	-0.1
6,502,995	-		Pf6N2E2_5688	0.13	+0.7
6,503,097	+		Pf6N2E2_5688	0.27	+1.8
6,503,097	+		Pf6N2E2_5688	0.27	+1.7
6,503,097	+		Pf6N2E2_5688	0.27	-0.7
6,503,098	-		Pf6N2E2_5688	0.27	+0.2
6,503,186	+		Pf6N2E2_5688	0.39	+1.8
6,503,186	+		Pf6N2E2_5688	0.39	+0.9
6,503,186	+		Pf6N2E2_5688	0.39	+0.7
6,503,186	+		Pf6N2E2_5688	0.39	-3.1
6,503,187	-		Pf6N2E2_5688	0.39	-2.1
6,503,187	-		Pf6N2E2_5688	0.39	-1.7
6,503,226	-		Pf6N2E2_5688	0.44	+0.8
6,503,226	-		Pf6N2E2_5688	0.44	-1.8
6,503,278	-		Pf6N2E2_5688	0.51	-0.4
6,503,307	+		Pf6N2E2_5688	0.55	+1.1
6,503,490	+		Pf6N2E2_5688	0.80	+0.9
6,503,490	+		Pf6N2E2_5688	0.80	-0.3
6,503,491	-		Pf6N2E2_5688	0.80	+3.8
6,503,491	-		Pf6N2E2_5688	0.80	+1.2
6,503,491	-		Pf6N2E2_5688	0.80	+0.6
6,503,509	+		Pf6N2E2_5688	0.82	+0.4
6,503,509	+		Pf6N2E2_5688	0.82	-2.4
6,503,510	-		Pf6N2E2_5688	0.82	+3.5
6,503,665	+				-0.3
6,503,665	+				+0.1
6,503,665	+				-1.1
6,503,665	+				-1.2
6,503,666	-				+1.0
6,503,666	-				-2.3
6,503,666	-				-1.1
6,503,666	-				-1.6
6,503,666	-				+1.8
6,503,666	-				+0.7
6,503,700	-				-0.7
6,503,700	-				+1.0
6,503,712	+				-2.7
6,503,712	+				+2.4
6,503,712	+				+0.7
6,503,793	-		Pf6N2E2_5689	0.13	-1.3