Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17600

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,007,343	+				-0.3
4,007,344	-				+0.2
4,007,344	-				-0.2
4,007,344	-				-0.2
4,007,348	+				-0.6
4,007,348	+				-2.1
4,007,348	+				+0.4
4,007,348	+				-0.3
4,007,349	-				-0.4
4,007,349	-				-1.7
4,007,407	+				-0.3
4,007,437	-				-0.8
4,007,462	+				-1.0
4,007,463	-				-2.7
4,007,466	-				-0.2
4,007,539	+		DDA3937_RS17595	0.15	-0.6
4,007,539	+		DDA3937_RS17595	0.15	+0.8
4,007,539	+		DDA3937_RS17595	0.15	-0.7
4,007,539	+		DDA3937_RS17595	0.15	-0.7
4,007,540	-		DDA3937_RS17595	0.15	-0.2
4,007,540	-		DDA3937_RS17595	0.15	+0.5
4,007,650	+		DDA3937_RS17595	0.42	-0.5
4,007,650	+		DDA3937_RS17595	0.42	+0.4
4,007,650	+		DDA3937_RS17595	0.42	-0.7
4,007,650	+		DDA3937_RS17595	0.42	+0.3
4,007,650	+		DDA3937_RS17595	0.42	-1.3
4,007,650	+		DDA3937_RS17595	0.42	+0.1
4,007,651	-		DDA3937_RS17595	0.42	+0.2
4,007,651	-		DDA3937_RS17595	0.42	-0.5
4,007,651	-		DDA3937_RS17595	0.42	+1.4
4,007,651	-		DDA3937_RS17595	0.42	-0.3
4,007,651	-		DDA3937_RS17595	0.42	-0.2
4,007,651	-		DDA3937_RS17595	0.42	-2.3
4,007,654	+		DDA3937_RS17595	0.43	-0.1
4,007,655	-		DDA3937_RS17595	0.43	+0.5
4,007,655	-		DDA3937_RS17595	0.43	+1.0
4,007,665	+		DDA3937_RS17595	0.45	-0.0
4,007,665	+		DDA3937_RS17595	0.45	-0.3
4,007,666	-		DDA3937_RS17595	0.45	-0.9
4,007,666	-		DDA3937_RS17595	0.45	-1.3
4,007,693	+		DDA3937_RS17595	0.52	+0.8
4,007,771	+		DDA3937_RS17595	0.70	-0.1
4,007,771	+		DDA3937_RS17595	0.70	-0.2
4,007,771	+		DDA3937_RS17595	0.70	-0.2
4,007,772	-				-0.2
4,007,881	+				-0.6
4,007,881	+				+0.3
4,007,882	-				+1.1
4,007,937	+				+0.5
4,007,938	-				-0.1
4,007,938	-				-0.6
4,007,938	-				-0.2
4,007,993	-				+0.5
4,007,993	-				+1.0
4,007,993	-				-0.3
4,007,994	+				-0.6
4,008,004	+				+0.9
4,008,005	-				-0.2
4,008,005	-				+0.3
4,008,036	+				-0.8
4,008,841	-		DDA3937_RS17600	0.55	+0.4
4,008,852	+		DDA3937_RS17600	0.56	-1.0
4,009,100	-		DDA3937_RS17600	0.81	-0.8
4,009,347	+				-1.0
4,009,352	+				-0.6
4,009,369	-				-0.8
4,009,591	+				-0.9
4,009,591	+				-0.4
4,009,592	-				-1.2
4,009,657	-				-0.5
4,009,816	+				+0.8
4,009,816	+				-0.7
4,009,817	-				-1.5
4,009,817	-				-0.5
4,009,817	-				+0.2
4,009,817	-				-0.2
4,009,817	-				-0.7
4,009,874	+				-0.0
4,009,874	+				-1.7
4,009,875	-				+0.1
4,009,875	-				+0.8
4,009,924	+				+0.4
4,009,924	+				-1.2
4,009,924	+				+0.3
4,009,925	-				-0.6
4,009,926	+				-0.6
4,009,926	+				+0.2
4,009,926	+				+1.2
4,009,926	+				+1.5
4,009,927	-				-0.2
4,009,927	-				-0.1
4,009,927	-				-0.2
4,009,927	-				-0.1
4,010,028	+		DDA3937_RS17605	0.13	-2.6
4,010,028	+		DDA3937_RS17605	0.13	-2.0
4,010,029	-		DDA3937_RS17605	0.13	+0.3
4,010,062	+		DDA3937_RS17605	0.14	+1.1
4,010,149	-		DDA3937_RS17605	0.17	+1.4
4,010,149	-		DDA3937_RS17605	0.17	-0.5
4,010,175	+		DDA3937_RS17605	0.18	-0.2
4,010,208	+		DDA3937_RS17605	0.20	+0.5
4,010,208	+		DDA3937_RS17605	0.20	+0.2
4,010,208	+		DDA3937_RS17605	0.20	-0.2
4,010,209	-		DDA3937_RS17605	0.20	-0.5
4,010,209	-		DDA3937_RS17605	0.20	-1.6
4,010,209	-		DDA3937_RS17605	0.20	-1.2
4,010,209	-		DDA3937_RS17605	0.20	+0.7