Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS12800

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,911,671	+		DDA3937_RS12795	0.79	+1.2
2,911,672	-		DDA3937_RS12795	0.79	+0.8
2,911,675	+		DDA3937_RS12795	0.79	+2.2
2,911,675	+		DDA3937_RS12795	0.79	+0.3
2,911,804	-		DDA3937_RS12795	0.83	+0.5
2,911,894	-		DDA3937_RS12795	0.86	+0.2
2,911,985	-		DDA3937_RS12795	0.89	+0.6
2,911,985	-		DDA3937_RS12795	0.89	+0.6
2,911,995	+		DDA3937_RS12795	0.90	-0.0
2,911,996	-		DDA3937_RS12795	0.90	+1.3
2,912,005	+		DDA3937_RS12795	0.90	-0.4
2,912,005	+		DDA3937_RS12795	0.90	+0.3
2,912,006	-				-0.8
2,912,006	-				-1.7
2,912,006	-				-0.4
2,912,006	-				+0.0
2,912,006	-				+1.3
2,912,170	-				+0.3
2,912,173	+				+0.3
2,912,173	+				-0.1
2,912,173	+				+0.6
2,912,173	+				-0.1
2,912,173	+				-0.0
2,912,173	+				-1.0
2,912,174	-				-0.2
2,912,174	-				+0.6
2,912,174	-				-0.2
2,912,174	-				-1.4
2,912,174	-				+0.2
2,912,174	-				-0.9
2,912,174	-				-0.9
2,912,312	+				+1.5
2,912,312	+				-1.5
2,912,312	+				+0.3
2,912,312	+				+0.2
2,912,312	+				+0.1
2,912,312	+				+0.0
2,912,312	+				+0.1
2,912,312	+				-0.8
2,912,312	+				-0.7
2,912,312	+				+0.0
2,912,312	+				+0.9
2,912,312	+				+0.0
2,912,313	-				-0.6
2,912,313	-				-0.2
2,912,313	-				-0.2
2,912,313	-				+1.3
2,912,313	-				-0.8
2,912,313	-				+0.1
2,912,313	-				+0.0
2,912,313	-				+1.8
2,912,313	-				-0.4
2,912,313	-				+0.7
2,912,313	-				-1.8
2,912,313	-				-0.5
2,912,350	+				-1.5
2,912,355	+				-1.0
2,912,356	-				-0.0
2,912,363	-				-1.2
2,912,365	+				+0.2
2,912,370	+				-1.3
2,912,370	+				+0.0
2,912,371	-				-0.2
2,912,492	+				-0.1
2,912,492	+				-0.8
2,912,492	+				-0.2
2,912,493	-				-0.7
2,912,630	+				-0.1
2,912,631	-				-0.5
2,912,649	-				-0.2
2,912,727	+				-2.1
2,912,797	-		DDA3937_RS12800	0.12	-1.5
2,912,826	-		DDA3937_RS12800	0.14	-1.8
2,913,106	+				-1.8
2,913,131	+		DDA3937_RS12800	0.42	-1.0
2,913,174	+		DDA3937_RS12800	0.46	-0.1
2,913,174	+		DDA3937_RS12800	0.46	-1.5
2,913,175	-		DDA3937_RS12800	0.46	-1.1
2,913,198	-		DDA3937_RS12800	0.48	-0.5
2,913,392	-		DDA3937_RS12800	0.66	-1.2
2,913,405	+		DDA3937_RS12800	0.67	-1.5
2,913,406	-		DDA3937_RS12800	0.67	-1.1
2,913,472	-		DDA3937_RS12800	0.73	-1.5
2,913,472	-		DDA3937_RS12800	0.73	-1.1
2,913,686	-				-1.1
2,913,816	+				-0.4
2,913,816	+				-1.0
2,913,878	+				-0.1
2,913,879	-				+0.8
2,913,889	+				+1.1
2,913,889	+				+0.0
2,913,889	+				+0.1
2,913,890	-				+0.2
2,913,890	-				-0.5
2,913,890	-				+0.0
2,913,890	-				-0.8
2,913,890	-				-0.1
2,913,929	+				-0.1
2,913,990	+				-1.8
2,913,990	+				+0.4
2,913,991	-				+0.5
2,913,991	-				+0.0
2,913,993	+				-1.1
2,913,993	+				-0.5
2,913,994	-				+0.2
2,914,009	+				-0.2
2,914,009	+				-0.1
2,914,009	+				+0.2
2,914,009	+				+0.5
2,914,009	+				+0.5
2,914,010	-				-0.9
2,914,020	+				-1.1
2,914,020	+				+0.1
2,914,020	+				-1.1
2,914,020	+				+0.6
2,914,021	-				-0.5
2,914,021	-				+0.5
2,914,021	-				-0.5
2,914,021	-				-0.7
2,914,021	-				+0.8
2,914,055	+				-0.9
2,914,055	+				-0.2
2,914,055	+				-0.3
2,914,055	+				+0.4
2,914,056	-				-2.1
2,914,056	-				+0.3
2,914,056	-				-0.3
2,914,056	-				+1.0
2,914,058	+				-2.1
2,914,075	+				-0.1
2,914,076	-				+2.1
2,914,206	-				-0.2
2,914,242	-				-0.6
2,914,262	+				-0.7
2,914,407	-				+0.1
2,914,407	-				-1.1
2,914,407	-				+0.2
2,914,407	-				-0.5
2,914,410	+				+1.1
2,914,411	-				-1.2
2,914,411	-				-0.1
2,914,468	-				-0.3
2,914,618	-		DDA3937_RS12805	0.15	-0.4
2,914,618	-		DDA3937_RS12805	0.15	-0.4
2,914,618	-		DDA3937_RS12805	0.15	+0.7
2,914,618	-		DDA3937_RS12805	0.15	+1.3