Experiment: D-Tagatose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00648 and MPMX20_00649 are separated by 261 nucleotides MPMX20_00649 and MPMX20_00650 are separated by 269 nucleotides MPMX20_00650 and MPMX20_00651 are separated by 85 nucleotides
MPMX20_00648: MPMX20_00648 - hypothetical protein, at 673,218 to 673,769
_00648
MPMX20_00649: MPMX20_00649 - Phosphoglycerol transferase I, at 674,031 to 676,322
_00649
MPMX20_00650: MPMX20_00650 - hypothetical protein, at 676,592 to 677,074
_00650
MPMX20_00651: MPMX20_00651 - DNA replication protein DnaC, at 677,160 to 677,897
_00651
Position (kb) 674
675
676
677 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 673.117 kb on - strand at 673.221 kb on + strand at 673.221 kb on + strand at 673.229 kb on - strand at 673.229 kb on - strand at 673.263 kb on - strand at 673.325 kb on - strand, within MPMX20_00648 at 673.326 kb on - strand, within MPMX20_00648 at 673.375 kb on + strand, within MPMX20_00648 at 673.412 kb on + strand, within MPMX20_00648 at 673.412 kb on + strand, within MPMX20_00648 at 673.423 kb on - strand, within MPMX20_00648 at 673.430 kb on - strand, within MPMX20_00648 at 673.460 kb on + strand, within MPMX20_00648 at 673.473 kb on + strand, within MPMX20_00648 at 673.486 kb on + strand, within MPMX20_00648 at 673.493 kb on + strand, within MPMX20_00648 at 673.494 kb on - strand, within MPMX20_00648 at 673.572 kb on - strand, within MPMX20_00648 at 673.623 kb on + strand, within MPMX20_00648 at 673.628 kb on + strand, within MPMX20_00648 at 673.636 kb on - strand, within MPMX20_00648 at 673.670 kb on + strand, within MPMX20_00648 at 673.670 kb on + strand, within MPMX20_00648 at 673.670 kb on + strand, within MPMX20_00648 at 673.670 kb on + strand, within MPMX20_00648 at 673.670 kb on + strand, within MPMX20_00648 at 673.678 kb on - strand, within MPMX20_00648 at 673.678 kb on - strand, within MPMX20_00648 at 673.678 kb on - strand, within MPMX20_00648 at 673.678 kb on - strand, within MPMX20_00648 at 673.678 kb on - strand, within MPMX20_00648 at 673.694 kb on + strand, within MPMX20_00648 at 673.695 kb on + strand, within MPMX20_00648 at 673.709 kb on + strand, within MPMX20_00648 at 673.718 kb on - strand at 673.732 kb on + strand at 673.738 kb on + strand at 673.785 kb on + strand at 673.795 kb on + strand at 673.804 kb on + strand at 673.804 kb on + strand at 673.812 kb on - strand at 673.812 kb on - strand at 673.812 kb on - strand at 673.820 kb on + strand at 673.822 kb on - strand at 673.824 kb on - strand at 673.832 kb on - strand at 673.861 kb on + strand at 673.867 kb on - strand at 673.869 kb on + strand at 673.869 kb on + strand at 673.876 kb on + strand at 673.877 kb on - strand at 673.877 kb on - strand at 673.884 kb on + strand at 673.884 kb on + strand at 673.884 kb on + strand at 673.884 kb on + strand at 673.884 kb on - strand at 673.892 kb on - strand at 673.941 kb on + strand at 673.950 kb on + strand at 673.981 kb on + strand at 673.990 kb on - strand at 674.015 kb on - strand at 674.029 kb on + strand at 674.032 kb on - strand at 674.058 kb on - strand at 674.134 kb on - strand at 674.144 kb on + strand at 674.147 kb on + strand at 674.148 kb on - strand at 674.180 kb on + strand at 674.274 kb on - strand, within MPMX20_00649 at 674.281 kb on + strand, within MPMX20_00649 at 674.289 kb on - strand, within MPMX20_00649 at 674.338 kb on - strand, within MPMX20_00649 at 674.351 kb on + strand, within MPMX20_00649 at 674.351 kb on + strand, within MPMX20_00649 at 674.351 kb on + strand, within MPMX20_00649 at 674.371 kb on - strand, within MPMX20_00649 at 674.397 kb on - strand, within MPMX20_00649 at 674.432 kb on + strand, within MPMX20_00649 at 674.440 kb on - strand, within MPMX20_00649 at 674.440 kb on - strand, within MPMX20_00649 at 674.519 kb on - strand, within MPMX20_00649 at 674.543 kb on - strand, within MPMX20_00649 at 674.592 kb on - strand, within MPMX20_00649 at 674.592 kb on - strand, within MPMX20_00649 at 674.638 kb on + strand, within MPMX20_00649 at 674.638 kb on + strand, within MPMX20_00649 at 674.641 kb on - strand, within MPMX20_00649 at 674.641 kb on - strand, within MPMX20_00649 at 674.665 kb on + strand, within MPMX20_00649 at 674.723 kb on + strand, within MPMX20_00649 at 674.723 kb on + strand, within MPMX20_00649 at 674.731 kb on - strand, within MPMX20_00649 at 674.731 kb on - strand, within MPMX20_00649 at 674.853 kb on - strand, within MPMX20_00649 at 674.881 kb on - strand, within MPMX20_00649 at 674.881 kb on - strand, within MPMX20_00649 at 675.002 kb on - strand, within MPMX20_00649 at 675.002 kb on - strand, within MPMX20_00649 at 675.012 kb on - strand, within MPMX20_00649 at 675.014 kb on + strand, within MPMX20_00649 at 675.064 kb on - strand, within MPMX20_00649 at 675.138 kb on + strand, within MPMX20_00649 at 675.153 kb on - strand, within MPMX20_00649 at 675.215 kb on + strand, within MPMX20_00649 at 675.243 kb on - strand, within MPMX20_00649 at 675.273 kb on + strand, within MPMX20_00649 at 675.296 kb on + strand, within MPMX20_00649 at 675.304 kb on - strand, within MPMX20_00649 at 675.304 kb on - strand, within MPMX20_00649 at 675.371 kb on + strand, within MPMX20_00649 at 675.401 kb on - strand, within MPMX20_00649 at 675.464 kb on + strand, within MPMX20_00649 at 675.472 kb on - strand, within MPMX20_00649 at 675.509 kb on + strand, within MPMX20_00649 at 675.587 kb on + strand, within MPMX20_00649 at 675.595 kb on - strand, within MPMX20_00649 at 675.609 kb on + strand, within MPMX20_00649 at 675.623 kb on - strand, within MPMX20_00649 at 675.636 kb on - strand, within MPMX20_00649 at 675.636 kb on - strand, within MPMX20_00649 at 675.636 kb on - strand, within MPMX20_00649 at 675.643 kb on - strand, within MPMX20_00649 at 675.658 kb on + strand, within MPMX20_00649 at 675.661 kb on + strand, within MPMX20_00649 at 675.690 kb on + strand, within MPMX20_00649 at 675.690 kb on + strand, within MPMX20_00649 at 675.690 kb on + strand, within MPMX20_00649 at 675.690 kb on + strand, within MPMX20_00649 at 675.690 kb on + strand, within MPMX20_00649 at 675.690 kb on + strand, within MPMX20_00649 at 675.698 kb on - strand, within MPMX20_00649 at 675.698 kb on - strand, within MPMX20_00649 at 675.699 kb on - strand, within MPMX20_00649 at 675.700 kb on + strand, within MPMX20_00649 at 675.728 kb on + strand, within MPMX20_00649 at 675.731 kb on - strand, within MPMX20_00649 at 675.793 kb on + strand, within MPMX20_00649 at 675.793 kb on + strand, within MPMX20_00649 at 675.796 kb on - strand, within MPMX20_00649 at 675.811 kb on + strand, within MPMX20_00649 at 675.822 kb on + strand, within MPMX20_00649 at 675.830 kb on - strand, within MPMX20_00649 at 675.846 kb on - strand, within MPMX20_00649 at 675.846 kb on - strand, within MPMX20_00649 at 675.869 kb on + strand, within MPMX20_00649 at 675.873 kb on + strand, within MPMX20_00649 at 675.908 kb on + strand, within MPMX20_00649 at 675.908 kb on + strand, within MPMX20_00649 at 675.913 kb on + strand, within MPMX20_00649 at 675.916 kb on - strand, within MPMX20_00649 at 675.976 kb on - strand, within MPMX20_00649 at 675.997 kb on - strand, within MPMX20_00649 at 676.024 kb on - strand, within MPMX20_00649 at 676.046 kb on - strand, within MPMX20_00649 at 676.046 kb on - strand, within MPMX20_00649 at 676.076 kb on + strand, within MPMX20_00649 at 676.076 kb on + strand, within MPMX20_00649 at 676.076 kb on + strand, within MPMX20_00649 at 676.084 kb on - strand, within MPMX20_00649 at 676.091 kb on + strand, within MPMX20_00649 at 676.091 kb on - strand, within MPMX20_00649 at 676.095 kb on + strand at 676.106 kb on + strand at 676.129 kb on - strand at 676.135 kb on + strand at 676.143 kb on - strand at 676.190 kb on + strand at 676.231 kb on - strand at 676.270 kb on - strand at 676.277 kb on - strand at 676.285 kb on - strand at 676.285 kb on - strand at 676.308 kb on + strand at 676.316 kb on - strand at 676.316 kb on - strand at 676.324 kb on + strand at 676.324 kb on + strand at 676.324 kb on + strand at 676.329 kb on + strand at 676.331 kb on - strand at 676.353 kb on - strand at 676.568 kb on + strand at 676.627 kb on + strand at 676.643 kb on - strand, within MPMX20_00650 at 676.667 kb on + strand, within MPMX20_00650 at 676.667 kb on - strand, within MPMX20_00650 at 676.769 kb on - strand, within MPMX20_00650 at 676.784 kb on - strand, within MPMX20_00650 at 676.884 kb on + strand, within MPMX20_00650 at 677.004 kb on + strand, within MPMX20_00650 at 677.039 kb on + strand at 677.049 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.129 kb on - strand at 677.129 kb on - strand at 677.129 kb on - strand at 677.129 kb on - strand at 677.129 kb on - strand at 677.129 kb on - strand at 677.129 kb on - strand at 677.129 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Tagatose (C) remove 673,117 - -0.6 673,221 + +0.2 673,221 + +0.0 673,229 - +1.6 673,229 - +1.7 673,263 - +2.4 673,325 - MPMX20_00648 0.19 -0.3 673,326 - MPMX20_00648 0.20 +1.5 673,375 + MPMX20_00648 0.28 -0.8 673,412 + MPMX20_00648 0.35 +0.6 673,412 + MPMX20_00648 0.35 -2.3 673,423 - MPMX20_00648 0.37 -2.4 673,430 - MPMX20_00648 0.38 -2.8 673,460 + MPMX20_00648 0.44 +0.5 673,473 + MPMX20_00648 0.46 -2.1 673,486 + MPMX20_00648 0.49 -0.1 673,493 + MPMX20_00648 0.50 -2.7 673,494 - MPMX20_00648 0.50 -1.0 673,572 - MPMX20_00648 0.64 +2.1 673,623 + MPMX20_00648 0.73 -3.2 673,628 + MPMX20_00648 0.74 +0.6 673,636 - MPMX20_00648 0.76 +3.6 673,670 + MPMX20_00648 0.82 -0.0 673,670 + MPMX20_00648 0.82 -0.7 673,670 + MPMX20_00648 0.82 -1.6 673,670 + MPMX20_00648 0.82 -1.1 673,670 + MPMX20_00648 0.82 +0.8 673,678 - MPMX20_00648 0.83 +0.6 673,678 - MPMX20_00648 0.83 +0.6 673,678 - MPMX20_00648 0.83 +0.2 673,678 - MPMX20_00648 0.83 -2.6 673,678 - MPMX20_00648 0.83 -1.4 673,694 + MPMX20_00648 0.86 +1.6 673,695 + MPMX20_00648 0.86 -1.8 673,709 + MPMX20_00648 0.89 -0.9 673,718 - +0.0 673,732 + +0.0 673,738 + +2.1 673,785 + +2.1 673,795 + -3.2 673,804 + +0.2 673,804 + -3.7 673,812 - +1.2 673,812 - -0.8 673,812 - -2.6 673,820 + +0.3 673,822 - +0.6 673,824 - +1.4 673,832 - +1.3 673,861 + -0.2 673,867 - +0.4 673,869 + -2.2 673,869 + +1.8 673,876 + +0.7 673,877 - +0.2 673,877 - -0.4 673,884 + -1.8 673,884 + +1.0 673,884 + -1.0 673,884 + +0.5 673,884 - -1.9 673,892 - +2.1 673,941 + +1.2 673,950 + +1.1 673,981 + -0.0 673,990 - -0.0 674,015 - -1.9 674,029 + +0.0 674,032 - -3.9 674,058 - -1.3 674,134 - -0.3 674,144 + +1.4 674,147 + -1.3 674,148 - +0.4 674,180 + +2.6 674,274 - MPMX20_00649 0.11 -0.3 674,281 + MPMX20_00649 0.11 -0.8 674,289 - MPMX20_00649 0.11 +1.1 674,338 - MPMX20_00649 0.13 +0.2 674,351 + MPMX20_00649 0.14 -0.7 674,351 + MPMX20_00649 0.14 +0.0 674,351 + MPMX20_00649 0.14 -0.9 674,371 - MPMX20_00649 0.15 +0.1 674,397 - MPMX20_00649 0.16 -3.7 674,432 + MPMX20_00649 0.17 -0.0 674,440 - MPMX20_00649 0.18 -2.3 674,440 - MPMX20_00649 0.18 +1.4 674,519 - MPMX20_00649 0.21 +0.6 674,543 - MPMX20_00649 0.22 +1.2 674,592 - MPMX20_00649 0.24 -0.1 674,592 - MPMX20_00649 0.24 -1.5 674,638 + MPMX20_00649 0.26 -2.5 674,638 + MPMX20_00649 0.26 -2.4 674,641 - MPMX20_00649 0.27 -2.9 674,641 - MPMX20_00649 0.27 +1.2 674,665 + MPMX20_00649 0.28 +0.6 674,723 + MPMX20_00649 0.30 -1.0 674,723 + MPMX20_00649 0.30 -4.1 674,731 - MPMX20_00649 0.31 +0.8 674,731 - MPMX20_00649 0.31 -1.3 674,853 - MPMX20_00649 0.36 +2.0 674,881 - MPMX20_00649 0.37 -0.3 674,881 - MPMX20_00649 0.37 -2.9 675,002 - MPMX20_00649 0.42 +0.5 675,002 - MPMX20_00649 0.42 +0.6 675,012 - MPMX20_00649 0.43 +1.0 675,014 + MPMX20_00649 0.43 +0.8 675,064 - MPMX20_00649 0.45 -0.1 675,138 + MPMX20_00649 0.48 +0.1 675,153 - MPMX20_00649 0.49 -1.3 675,215 + MPMX20_00649 0.52 -0.3 675,243 - MPMX20_00649 0.53 -0.2 675,273 + MPMX20_00649 0.54 -0.0 675,296 + MPMX20_00649 0.55 -0.0 675,304 - MPMX20_00649 0.56 +0.8 675,304 - MPMX20_00649 0.56 -1.5 675,371 + MPMX20_00649 0.58 -4.7 675,401 - MPMX20_00649 0.60 -0.4 675,464 + MPMX20_00649 0.63 +0.8 675,472 - MPMX20_00649 0.63 +0.5 675,509 + MPMX20_00649 0.64 -0.1 675,587 + MPMX20_00649 0.68 +0.5 675,595 - MPMX20_00649 0.68 -1.6 675,609 + MPMX20_00649 0.69 -2.1 675,623 - MPMX20_00649 0.69 -1.1 675,636 - MPMX20_00649 0.70 +1.0 675,636 - MPMX20_00649 0.70 -0.8 675,636 - MPMX20_00649 0.70 -0.0 675,643 - MPMX20_00649 0.70 -0.3 675,658 + MPMX20_00649 0.71 -0.4 675,661 + MPMX20_00649 0.71 +1.8 675,690 + MPMX20_00649 0.72 +0.2 675,690 + MPMX20_00649 0.72 +4.5 675,690 + MPMX20_00649 0.72 -0.3 675,690 + MPMX20_00649 0.72 -1.3 675,690 + MPMX20_00649 0.72 -2.1 675,690 + MPMX20_00649 0.72 -0.9 675,698 - MPMX20_00649 0.73 -1.4 675,698 - MPMX20_00649 0.73 -1.1 675,699 - MPMX20_00649 0.73 -1.4 675,700 + MPMX20_00649 0.73 +0.0 675,728 + MPMX20_00649 0.74 -1.3 675,731 - MPMX20_00649 0.74 -0.6 675,793 + MPMX20_00649 0.77 -2.7 675,793 + MPMX20_00649 0.77 -1.7 675,796 - MPMX20_00649 0.77 -4.0 675,811 + MPMX20_00649 0.78 +1.3 675,822 + MPMX20_00649 0.78 +0.2 675,830 - MPMX20_00649 0.78 +0.6 675,846 - MPMX20_00649 0.79 +1.3 675,846 - MPMX20_00649 0.79 +0.4 675,869 + MPMX20_00649 0.80 -1.0 675,873 + MPMX20_00649 0.80 +0.5 675,908 + MPMX20_00649 0.82 -0.8 675,908 + MPMX20_00649 0.82 +1.0 675,913 + MPMX20_00649 0.82 +1.0 675,916 - MPMX20_00649 0.82 +1.6 675,976 - MPMX20_00649 0.85 -2.6 675,997 - MPMX20_00649 0.86 +1.0 676,024 - MPMX20_00649 0.87 +3.7 676,046 - MPMX20_00649 0.88 +0.8 676,046 - MPMX20_00649 0.88 +1.7 676,076 + MPMX20_00649 0.89 -1.4 676,076 + MPMX20_00649 0.89 -1.6 676,076 + MPMX20_00649 0.89 +0.6 676,084 - MPMX20_00649 0.90 +0.2 676,091 + MPMX20_00649 0.90 -1.1 676,091 - MPMX20_00649 0.90 +0.6 676,095 + -1.1 676,106 + -1.2 676,129 - +0.2 676,135 + +1.3 676,143 - -2.7 676,190 + +1.6 676,231 - -3.1 676,270 - +1.8 676,277 - -0.8 676,285 - +0.4 676,285 - +1.0 676,308 + -3.1 676,316 - -0.3 676,316 - +0.7 676,324 + -0.8 676,324 + +0.6 676,324 + -2.8 676,329 + -1.1 676,331 - +2.4 676,353 - -0.6 676,568 + -0.9 676,627 + +0.5 676,643 - MPMX20_00650 0.11 +0.8 676,667 + MPMX20_00650 0.16 +1.5 676,667 - MPMX20_00650 0.16 -0.3 676,769 - MPMX20_00650 0.37 +2.3 676,784 - MPMX20_00650 0.40 -0.2 676,884 + MPMX20_00650 0.60 +0.2 677,004 + MPMX20_00650 0.85 +1.0 677,039 + -1.3 677,049 + +0.1 677,121 + +0.9 677,121 + -1.5 677,121 + -0.1 677,121 + +1.0 677,121 + -1.8 677,121 + -0.4 677,121 + +0.9 677,121 + +1.0 677,121 + +2.7 677,121 + +0.2 677,121 + +0.5 677,121 + -0.4 677,121 + -0.5 677,121 + +0.7 677,121 + -0.7 677,121 + -1.9 677,121 + -0.0 677,121 + +0.8 677,129 - +1.1 677,129 - +0.7 677,129 - -0.3 677,129 - -0.7 677,129 - -1.7 677,129 - +0.9 677,129 - -0.8 677,129 - -3.3
Or see this region's nucleotide sequence