Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03468

Experiment: D-Salicin (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_03466 and MPMX20_03467 overlap by 4 nucleotidesMPMX20_03467 and MPMX20_03468 are separated by 60 nucleotidesMPMX20_03468 and MPMX20_03469 are separated by 10 nucleotides MPMX20_03466: MPMX20_03466 - Bifunctional chorismate mutase/prephenate dehydratase, at 3,657,537 to 3,658,697 _03466 MPMX20_03467: MPMX20_03467 - 6-deoxy-6-sulfogluconolactonase, at 3,658,694 to 3,659,566 _03467 MPMX20_03468: MPMX20_03468 - T-protein, at 3,659,627 to 3,660,748 _03468 MPMX20_03469: MPMX20_03469 - Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive, at 3,660,759 to 3,661,829 _03469 Position (kb) 3659 3660 3661Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 3658.689 kb on - strandat 3658.752 kb on - strandat 3658.899 kb on - strand, within MPMX20_03467at 3658.913 kb on - strand, within MPMX20_03467at 3658.977 kb on + strand, within MPMX20_03467at 3658.983 kb on + strand, within MPMX20_03467at 3658.985 kb on - strand, within MPMX20_03467at 3658.985 kb on - strand, within MPMX20_03467at 3658.996 kb on - strand, within MPMX20_03467at 3658.999 kb on + strand, within MPMX20_03467at 3659.007 kb on - strand, within MPMX20_03467at 3659.080 kb on + strand, within MPMX20_03467at 3659.088 kb on - strand, within MPMX20_03467at 3659.088 kb on - strand, within MPMX20_03467at 3659.191 kb on - strand, within MPMX20_03467at 3659.220 kb on - strand, within MPMX20_03467at 3659.223 kb on - strand, within MPMX20_03467at 3659.237 kb on - strand, within MPMX20_03467at 3659.319 kb on + strand, within MPMX20_03467at 3659.376 kb on + strand, within MPMX20_03467at 3659.376 kb on + strand, within MPMX20_03467at 3659.386 kb on + strand, within MPMX20_03467at 3659.386 kb on + strand, within MPMX20_03467at 3659.386 kb on + strand, within MPMX20_03467at 3659.386 kb on + strand, within MPMX20_03467at 3659.396 kb on + strand, within MPMX20_03467at 3659.465 kb on - strand, within MPMX20_03467at 3659.478 kb on + strand, within MPMX20_03467at 3659.478 kb on + strand, within MPMX20_03467at 3659.478 kb on + strand, within MPMX20_03467at 3659.486 kb on - strandat 3659.486 kb on - strandat 3659.486 kb on - strandat 3659.561 kb on + strandat 3659.561 kb on + strandat 3659.569 kb on - strandat 3659.659 kb on - strandat 3659.755 kb on + strand, within MPMX20_03468at 3659.762 kb on + strand, within MPMX20_03468at 3659.763 kb on - strand, within MPMX20_03468at 3659.803 kb on + strand, within MPMX20_03468at 3659.803 kb on + strand, within MPMX20_03468at 3659.803 kb on + strand, within MPMX20_03468at 3659.811 kb on - strand, within MPMX20_03468at 3659.821 kb on - strand, within MPMX20_03468at 3659.851 kb on + strand, within MPMX20_03468at 3659.895 kb on - strand, within MPMX20_03468at 3659.963 kb on + strand, within MPMX20_03468at 3660.022 kb on - strand, within MPMX20_03468at 3660.043 kb on - strand, within MPMX20_03468at 3660.072 kb on - strand, within MPMX20_03468at 3660.074 kb on + strand, within MPMX20_03468at 3660.084 kb on + strand, within MPMX20_03468at 3660.102 kb on + strand, within MPMX20_03468at 3660.115 kb on - strand, within MPMX20_03468at 3660.119 kb on - strand, within MPMX20_03468at 3660.313 kb on - strand, within MPMX20_03468at 3660.334 kb on + strand, within MPMX20_03468at 3660.432 kb on - strand, within MPMX20_03468at 3660.432 kb on - strand, within MPMX20_03468at 3660.529 kb on - strand, within MPMX20_03468at 3660.666 kb on + strandat 3660.666 kb on + strandat 3660.674 kb on - strandat 3660.696 kb on + strandat 3660.704 kb on - strandat 3660.704 kb on - strandat 3660.704 kb on - strandat 3660.731 kb on + strandat 3660.756 kb on - strandat 3660.756 kb on - strandat 3660.864 kb on + strandat 3660.869 kb on + strand, within MPMX20_03469at 3660.869 kb on + strand, within MPMX20_03469at 3660.869 kb on + strand, within MPMX20_03469at 3660.877 kb on - strand, within MPMX20_03469at 3660.879 kb on + strand, within MPMX20_03469at 3660.999 kb on - strand, within MPMX20_03469at 3661.053 kb on - strand, within MPMX20_03469at 3661.075 kb on + strand, within MPMX20_03469at 3661.085 kb on + strand, within MPMX20_03469at 3661.101 kb on - strand, within MPMX20_03469at 3661.137 kb on - strand, within MPMX20_03469at 3661.147 kb on + strand, within MPMX20_03469at 3661.155 kb on - strand, within MPMX20_03469at 3661.155 kb on - strand, within MPMX20_03469at 3661.176 kb on - strand, within MPMX20_03469at 3661.181 kb on - strand, within MPMX20_03469at 3661.187 kb on + strand, within MPMX20_03469at 3661.195 kb on - strand, within MPMX20_03469at 3661.292 kb on + strand, within MPMX20_03469at 3661.322 kb on + strand, within MPMX20_03469at 3661.322 kb on + strand, within MPMX20_03469at 3661.418 kb on - strand, within MPMX20_03469at 3661.423 kb on - strand, within MPMX20_03469at 3661.503 kb on + strand, within MPMX20_03469at 3661.511 kb on - strand, within MPMX20_03469at 3661.511 kb on - strand, within MPMX20_03469at 3661.552 kb on + strand, within MPMX20_03469at 3661.556 kb on + strand, within MPMX20_03469at 3661.560 kb on - strand, within MPMX20_03469at 3661.562 kb on + strand, within MPMX20_03469at 3661.640 kb on - strand, within MPMX20_03469at 3661.654 kb on + strand, within MPMX20_03469at 3661.692 kb on - strand, within MPMX20_03469

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
remove
3,658,689 - -1.0
3,658,752 - -2.1
3,658,899 - MPMX20_03467 0.23 +0.3
3,658,913 - MPMX20_03467 0.25 -0.6
3,658,977 + MPMX20_03467 0.32 +0.2
3,658,983 + MPMX20_03467 0.33 -0.4
3,658,985 - MPMX20_03467 0.33 +1.6
3,658,985 - MPMX20_03467 0.33 -0.4
3,658,996 - MPMX20_03467 0.35 +0.7
3,658,999 + MPMX20_03467 0.35 +0.6
3,659,007 - MPMX20_03467 0.36 -0.7
3,659,080 + MPMX20_03467 0.44 +0.1
3,659,088 - MPMX20_03467 0.45 -0.1
3,659,088 - MPMX20_03467 0.45 -0.4
3,659,191 - MPMX20_03467 0.57 +0.9
3,659,220 - MPMX20_03467 0.60 -0.4
3,659,223 - MPMX20_03467 0.61 -0.6
3,659,237 - MPMX20_03467 0.62 -0.4
3,659,319 + MPMX20_03467 0.72 +0.8
3,659,376 + MPMX20_03467 0.78 -0.9
3,659,376 + MPMX20_03467 0.78 +0.8
3,659,386 + MPMX20_03467 0.79 -0.1
3,659,386 + MPMX20_03467 0.79 -0.4
3,659,386 + MPMX20_03467 0.79 +0.5
3,659,386 + MPMX20_03467 0.79 -0.2
3,659,396 + MPMX20_03467 0.80 +0.8
3,659,465 - MPMX20_03467 0.88 -0.2
3,659,478 + MPMX20_03467 0.90 +1.6
3,659,478 + MPMX20_03467 0.90 +1.3
3,659,478 + MPMX20_03467 0.90 -3.0
3,659,486 - -1.5
3,659,486 - -0.9
3,659,486 - -1.1
3,659,561 + +1.1
3,659,561 + -0.3
3,659,569 - -0.4
3,659,659 - -0.6
3,659,755 + MPMX20_03468 0.11 -3.0
3,659,762 + MPMX20_03468 0.12 -3.0
3,659,763 - MPMX20_03468 0.12 -1.2
3,659,803 + MPMX20_03468 0.16 -1.6
3,659,803 + MPMX20_03468 0.16 -2.9
3,659,803 + MPMX20_03468 0.16 -2.2
3,659,811 - MPMX20_03468 0.16 -3.2
3,659,821 - MPMX20_03468 0.17 -3.8
3,659,851 + MPMX20_03468 0.20 -3.4
3,659,895 - MPMX20_03468 0.24 -4.0
3,659,963 + MPMX20_03468 0.30 -3.6
3,660,022 - MPMX20_03468 0.35 -3.7
3,660,043 - MPMX20_03468 0.37 -5.0
3,660,072 - MPMX20_03468 0.40 -2.0
3,660,074 + MPMX20_03468 0.40 -2.6
3,660,084 + MPMX20_03468 0.41 -2.0
3,660,102 + MPMX20_03468 0.42 -3.4
3,660,115 - MPMX20_03468 0.43 -3.6
3,660,119 - MPMX20_03468 0.44 -4.3
3,660,313 - MPMX20_03468 0.61 -4.3
3,660,334 + MPMX20_03468 0.63 -2.8
3,660,432 - MPMX20_03468 0.72 -3.0
3,660,432 - MPMX20_03468 0.72 -2.7
3,660,529 - MPMX20_03468 0.80 -3.1
3,660,666 + -3.4
3,660,666 + -2.5
3,660,674 - -2.8
3,660,696 + -4.2
3,660,704 - -2.2
3,660,704 - -2.0
3,660,704 - -5.4
3,660,731 + -1.7
3,660,756 - +0.2
3,660,756 - +0.5
3,660,864 + -2.5
3,660,869 + MPMX20_03469 0.10 -3.3
3,660,869 + MPMX20_03469 0.10 -3.9
3,660,869 + MPMX20_03469 0.10 -3.0
3,660,877 - MPMX20_03469 0.11 -0.4
3,660,879 + MPMX20_03469 0.11 -3.7
3,660,999 - MPMX20_03469 0.22 -0.0
3,661,053 - MPMX20_03469 0.27 -1.4
3,661,075 + MPMX20_03469 0.30 -3.6
3,661,085 + MPMX20_03469 0.30 -0.8
3,661,101 - MPMX20_03469 0.32 -1.2
3,661,137 - MPMX20_03469 0.35 -0.6
3,661,147 + MPMX20_03469 0.36 -2.2
3,661,155 - MPMX20_03469 0.37 -1.0
3,661,155 - MPMX20_03469 0.37 -1.3
3,661,176 - MPMX20_03469 0.39 -1.0
3,661,181 - MPMX20_03469 0.39 -1.5
3,661,187 + MPMX20_03469 0.40 -2.1
3,661,195 - MPMX20_03469 0.41 -1.1
3,661,292 + MPMX20_03469 0.50 -2.5
3,661,322 + MPMX20_03469 0.53 -2.4
3,661,322 + MPMX20_03469 0.53 +0.8
3,661,418 - MPMX20_03469 0.62 -1.7
3,661,423 - MPMX20_03469 0.62 -2.7
3,661,503 + MPMX20_03469 0.69 -2.1
3,661,511 - MPMX20_03469 0.70 -2.2
3,661,511 - MPMX20_03469 0.70 -1.9
3,661,552 + MPMX20_03469 0.74 -1.9
3,661,556 + MPMX20_03469 0.74 -2.4
3,661,560 - MPMX20_03469 0.75 -0.1
3,661,562 + MPMX20_03469 0.75 -3.1
3,661,640 - MPMX20_03469 0.82 -1.3
3,661,654 + MPMX20_03469 0.84 -2.1
3,661,692 - MPMX20_03469 0.87 -1.6

Or see this region's nucleotide sequence