Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01156

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01155 and MPMX20_01156 are separated by 69 nucleotidesMPMX20_01156 and MPMX20_01157 are separated by 330 nucleotides MPMX20_01155: MPMX20_01155 - multidrug efflux RND transporter permease subunit OqxB3, at 1,216,435 to 1,219,587 _01155 MPMX20_01156: MPMX20_01156 - hypothetical protein, at 1,219,657 to 1,220,133 _01156 MPMX20_01157: MPMX20_01157 - hypothetical protein, at 1,220,464 to 1,221,843 _01157 Position (kb) 1219 1220 1221Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1218.667 kb on - strand, within MPMX20_01155at 1218.684 kb on + strand, within MPMX20_01155at 1218.702 kb on - strand, within MPMX20_01155at 1218.711 kb on - strand, within MPMX20_01155at 1218.728 kb on + strand, within MPMX20_01155at 1218.736 kb on - strand, within MPMX20_01155at 1218.738 kb on + strand, within MPMX20_01155at 1218.738 kb on + strand, within MPMX20_01155at 1218.781 kb on + strand, within MPMX20_01155at 1218.801 kb on - strand, within MPMX20_01155at 1218.954 kb on + strand, within MPMX20_01155at 1218.964 kb on - strand, within MPMX20_01155at 1218.966 kb on + strand, within MPMX20_01155at 1218.989 kb on + strand, within MPMX20_01155at 1219.041 kb on - strand, within MPMX20_01155at 1219.041 kb on - strand, within MPMX20_01155at 1219.062 kb on - strand, within MPMX20_01155at 1219.067 kb on - strand, within MPMX20_01155at 1219.163 kb on - strand, within MPMX20_01155at 1219.191 kb on + strand, within MPMX20_01155at 1219.236 kb on + strand, within MPMX20_01155at 1219.252 kb on + strand, within MPMX20_01155at 1219.258 kb on + strand, within MPMX20_01155at 1219.299 kb on - strandat 1219.347 kb on - strandat 1219.372 kb on + strandat 1219.436 kb on + strandat 1219.444 kb on - strandat 1219.444 kb on - strandat 1219.475 kb on + strandat 1219.514 kb on - strandat 1219.534 kb on - strandat 1219.534 kb on - strandat 1219.534 kb on - strandat 1219.595 kb on - strandat 1219.595 kb on - strandat 1219.649 kb on + strandat 1219.649 kb on + strandat 1219.649 kb on + strandat 1219.649 kb on + strandat 1219.649 kb on + strandat 1219.651 kb on - strandat 1219.657 kb on - strandat 1219.657 kb on - strandat 1219.657 kb on - strandat 1219.657 kb on - strandat 1219.777 kb on - strand, within MPMX20_01156at 1219.799 kb on + strand, within MPMX20_01156at 1219.908 kb on + strand, within MPMX20_01156at 1219.968 kb on - strand, within MPMX20_01156at 1220.002 kb on - strand, within MPMX20_01156at 1220.038 kb on + strand, within MPMX20_01156at 1220.038 kb on + strand, within MPMX20_01156at 1220.061 kb on - strand, within MPMX20_01156at 1220.061 kb on - strand, within MPMX20_01156at 1220.090 kb on - strandat 1220.097 kb on - strandat 1220.101 kb on + strandat 1220.109 kb on - strandat 1220.140 kb on + strandat 1220.140 kb on + strandat 1220.140 kb on + strandat 1220.140 kb on + strandat 1220.140 kb on + strandat 1220.140 kb on + strandat 1220.140 kb on + strandat 1220.140 kb on + strandat 1220.145 kb on + strandat 1220.175 kb on + strandat 1220.175 kb on + strandat 1220.175 kb on + strandat 1220.175 kb on + strandat 1220.183 kb on - strandat 1220.240 kb on + strandat 1220.240 kb on + strandat 1220.240 kb on + strandat 1220.240 kb on + strandat 1220.243 kb on - strandat 1220.245 kb on + strandat 1220.245 kb on + strandat 1220.248 kb on - strandat 1220.248 kb on - strandat 1220.253 kb on - strandat 1220.277 kb on + strandat 1220.287 kb on - strandat 1220.289 kb on + strandat 1220.289 kb on + strandat 1220.289 kb on + strandat 1220.289 kb on + strandat 1220.289 kb on + strandat 1220.289 kb on + strandat 1220.289 kb on + strandat 1220.289 kb on + strandat 1220.289 kb on + strandat 1220.297 kb on - strandat 1220.297 kb on - strandat 1220.297 kb on - strandat 1220.297 kb on - strandat 1220.297 kb on - strandat 1220.298 kb on - strandat 1220.301 kb on + strandat 1220.301 kb on + strandat 1220.301 kb on + strandat 1220.301 kb on + strandat 1220.309 kb on - strandat 1220.309 kb on - strandat 1220.309 kb on - strandat 1220.309 kb on - strandat 1220.418 kb on + strandat 1220.418 kb on + strandat 1220.418 kb on + strandat 1220.423 kb on + strandat 1220.426 kb on - strandat 1220.444 kb on + strandat 1220.444 kb on + strandat 1220.444 kb on + strandat 1220.449 kb on + strandat 1220.449 kb on + strandat 1220.449 kb on + strandat 1220.452 kb on - strandat 1220.457 kb on - strandat 1220.457 kb on - strandat 1220.457 kb on - strandat 1220.457 kb on - strandat 1220.457 kb on - strandat 1220.467 kb on - strandat 1220.487 kb on + strandat 1220.495 kb on - strandat 1220.525 kb on + strandat 1220.577 kb on + strandat 1220.585 kb on - strandat 1220.585 kb on - strandat 1220.587 kb on + strandat 1220.587 kb on + strandat 1220.587 kb on + strandat 1220.595 kb on - strandat 1220.595 kb on - strandat 1220.618 kb on - strand, within MPMX20_01157at 1220.703 kb on + strand, within MPMX20_01157at 1220.711 kb on - strand, within MPMX20_01157at 1220.713 kb on + strand, within MPMX20_01157at 1220.721 kb on - strand, within MPMX20_01157at 1220.804 kb on - strand, within MPMX20_01157at 1220.805 kb on - strand, within MPMX20_01157at 1220.823 kb on - strand, within MPMX20_01157at 1220.848 kb on + strand, within MPMX20_01157at 1220.848 kb on + strand, within MPMX20_01157at 1220.856 kb on - strand, within MPMX20_01157at 1220.856 kb on - strand, within MPMX20_01157at 1220.871 kb on + strand, within MPMX20_01157at 1220.879 kb on - strand, within MPMX20_01157at 1220.973 kb on + strand, within MPMX20_01157at 1220.981 kb on - strand, within MPMX20_01157at 1220.988 kb on - strand, within MPMX20_01157at 1221.028 kb on - strand, within MPMX20_01157at 1221.079 kb on + strand, within MPMX20_01157at 1221.080 kb on + strand, within MPMX20_01157at 1221.103 kb on + strand, within MPMX20_01157

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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1,218,667 - MPMX20_01155 0.71 -0.8
1,218,684 + MPMX20_01155 0.71 -0.6
1,218,702 - MPMX20_01155 0.72 -0.1
1,218,711 - MPMX20_01155 0.72 +1.6
1,218,728 + MPMX20_01155 0.73 +0.5
1,218,736 - MPMX20_01155 0.73 +0.0
1,218,738 + MPMX20_01155 0.73 -0.4
1,218,738 + MPMX20_01155 0.73 -1.0
1,218,781 + MPMX20_01155 0.74 -0.3
1,218,801 - MPMX20_01155 0.75 +0.3
1,218,954 + MPMX20_01155 0.80 -0.1
1,218,964 - MPMX20_01155 0.80 -0.3
1,218,966 + MPMX20_01155 0.80 -0.1
1,218,989 + MPMX20_01155 0.81 -0.3
1,219,041 - MPMX20_01155 0.83 -1.3
1,219,041 - MPMX20_01155 0.83 -0.2
1,219,062 - MPMX20_01155 0.83 -1.3
1,219,067 - MPMX20_01155 0.83 -0.1
1,219,163 - MPMX20_01155 0.87 -0.5
1,219,191 + MPMX20_01155 0.87 -0.1
1,219,236 + MPMX20_01155 0.89 +0.6
1,219,252 + MPMX20_01155 0.89 -0.1
1,219,258 + MPMX20_01155 0.90 -0.8
1,219,299 - +0.8
1,219,347 - -0.2
1,219,372 + +0.9
1,219,436 + -0.0
1,219,444 - +0.3
1,219,444 - -1.0
1,219,475 + -0.5
1,219,514 - -0.3
1,219,534 - -1.0
1,219,534 - -0.0
1,219,534 - -0.7
1,219,595 - +0.3
1,219,595 - -1.0
1,219,649 + -0.2
1,219,649 + -0.3
1,219,649 + -0.1
1,219,649 + -0.6
1,219,649 + -0.2
1,219,651 - -1.1
1,219,657 - -0.7
1,219,657 - +0.3
1,219,657 - +0.4
1,219,657 - +1.9
1,219,777 - MPMX20_01156 0.25 -0.5
1,219,799 + MPMX20_01156 0.30 -1.1
1,219,908 + MPMX20_01156 0.53 -1.7
1,219,968 - MPMX20_01156 0.65 -3.0
1,220,002 - MPMX20_01156 0.72 -4.0
1,220,038 + MPMX20_01156 0.80 -1.3
1,220,038 + MPMX20_01156 0.80 -2.4
1,220,061 - MPMX20_01156 0.85 -3.7
1,220,061 - MPMX20_01156 0.85 -2.5
1,220,090 - -2.0
1,220,097 - -2.4
1,220,101 + -2.3
1,220,109 - -3.0
1,220,140 + -1.8
1,220,140 + -3.1
1,220,140 + -1.0
1,220,140 + -1.0
1,220,140 + -3.1
1,220,140 + -1.0
1,220,140 + -1.2
1,220,140 + -2.7
1,220,145 + -1.4
1,220,175 + -0.4
1,220,175 + -3.0
1,220,175 + -1.2
1,220,175 + -1.0
1,220,183 - -1.1
1,220,240 + +1.9
1,220,240 + +0.9
1,220,240 + +0.8
1,220,240 + +0.2
1,220,243 - +0.0
1,220,245 + -1.2
1,220,245 + +1.2
1,220,248 - +1.4
1,220,248 - -0.1
1,220,253 - -0.5
1,220,277 + +0.2
1,220,287 - -0.4
1,220,289 + -0.4
1,220,289 + -0.5
1,220,289 + -1.6
1,220,289 + -0.9
1,220,289 + +0.1
1,220,289 + -1.3
1,220,289 + -0.1
1,220,289 + +0.3
1,220,289 + +0.4
1,220,297 - +0.1
1,220,297 - -0.8
1,220,297 - -0.1
1,220,297 - -0.7
1,220,297 - -0.3
1,220,298 - -0.2
1,220,301 + -0.6
1,220,301 + +0.7
1,220,301 + +1.6
1,220,301 + -0.7
1,220,309 - -0.7
1,220,309 - -1.0
1,220,309 - -0.6
1,220,309 - -0.0
1,220,418 + +0.3
1,220,418 + +0.4
1,220,418 + +0.2
1,220,423 + -0.6
1,220,426 - -0.6
1,220,444 + -0.4
1,220,444 + +0.8
1,220,444 + -0.6
1,220,449 + +0.7
1,220,449 + -0.3
1,220,449 + -0.5
1,220,452 - -0.1
1,220,457 - +0.3
1,220,457 - -1.2
1,220,457 - +0.3
1,220,457 - -0.1
1,220,457 - -0.5
1,220,467 - +0.4
1,220,487 + +0.5
1,220,495 - -1.3
1,220,525 + +0.1
1,220,577 + -0.8
1,220,585 - +0.1
1,220,585 - +0.5
1,220,587 + +0.1
1,220,587 + -1.6
1,220,587 + -0.0
1,220,595 - +0.1
1,220,595 - -0.5
1,220,618 - MPMX20_01157 0.11 +0.1
1,220,703 + MPMX20_01157 0.17 +0.6
1,220,711 - MPMX20_01157 0.18 +0.6
1,220,713 + MPMX20_01157 0.18 +0.1
1,220,721 - MPMX20_01157 0.19 +0.2
1,220,804 - MPMX20_01157 0.25 -0.6
1,220,805 - MPMX20_01157 0.25 +0.2
1,220,823 - MPMX20_01157 0.26 -0.9
1,220,848 + MPMX20_01157 0.28 +1.9
1,220,848 + MPMX20_01157 0.28 -0.1
1,220,856 - MPMX20_01157 0.28 +1.9
1,220,856 - MPMX20_01157 0.28 -0.7
1,220,871 + MPMX20_01157 0.29 +0.3
1,220,879 - MPMX20_01157 0.30 -0.3
1,220,973 + MPMX20_01157 0.37 -0.4
1,220,981 - MPMX20_01157 0.37 +1.6
1,220,988 - MPMX20_01157 0.38 -1.4
1,221,028 - MPMX20_01157 0.41 -0.2
1,221,079 + MPMX20_01157 0.45 -0.4
1,221,080 + MPMX20_01157 0.45 +0.4
1,221,103 + MPMX20_01157 0.46 -1.4

Or see this region's nucleotide sequence