Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01986 and MPMX20_01987 are separated by 53 nucleotides MPMX20_01987 and MPMX20_01988 are separated by 41 nucleotides
MPMX20_01986: MPMX20_01986 - N-ethylmaleimide reductase, at 2,076,158 to 2,077,255
_01986
MPMX20_01987: MPMX20_01987 - HTH-type transcriptional repressor NemR, at 2,077,309 to 2,077,908
_01987
MPMX20_01988: MPMX20_01988 - Phosphoethanolamine transferase EptA, at 2,077,950 to 2,079,575
_01988
Position (kb)
2077
2078 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2076.344 kb on + strand, within MPMX20_01986 at 2076.352 kb on - strand, within MPMX20_01986 at 2076.369 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.408 kb on + strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.416 kb on - strand, within MPMX20_01986 at 2076.441 kb on + strand, within MPMX20_01986 at 2076.449 kb on - strand, within MPMX20_01986 at 2076.487 kb on + strand, within MPMX20_01986 at 2076.495 kb on - strand, within MPMX20_01986 at 2076.518 kb on + strand, within MPMX20_01986 at 2076.626 kb on + strand, within MPMX20_01986 at 2076.634 kb on - strand, within MPMX20_01986 at 2076.634 kb on - strand, within MPMX20_01986 at 2076.661 kb on + strand, within MPMX20_01986 at 2076.732 kb on - strand, within MPMX20_01986 at 2076.786 kb on + strand, within MPMX20_01986 at 2076.796 kb on + strand, within MPMX20_01986 at 2076.796 kb on + strand, within MPMX20_01986 at 2076.796 kb on + strand, within MPMX20_01986 at 2076.796 kb on + strand, within MPMX20_01986 at 2076.796 kb on + strand, within MPMX20_01986 at 2076.804 kb on - strand, within MPMX20_01986 at 2076.804 kb on - strand, within MPMX20_01986 at 2076.804 kb on - strand, within MPMX20_01986 at 2076.804 kb on - strand, within MPMX20_01986 at 2076.804 kb on - strand, within MPMX20_01986 at 2076.811 kb on + strand, within MPMX20_01986 at 2076.811 kb on + strand, within MPMX20_01986 at 2076.811 kb on + strand, within MPMX20_01986 at 2076.819 kb on - strand, within MPMX20_01986 at 2076.819 kb on - strand, within MPMX20_01986 at 2076.880 kb on + strand, within MPMX20_01986 at 2076.880 kb on + strand, within MPMX20_01986 at 2076.919 kb on - strand, within MPMX20_01986 at 2076.924 kb on - strand, within MPMX20_01986 at 2076.976 kb on - strand, within MPMX20_01986 at 2077.018 kb on + strand, within MPMX20_01986 at 2077.018 kb on + strand, within MPMX20_01986 at 2077.018 kb on + strand, within MPMX20_01986 at 2077.026 kb on - strand, within MPMX20_01986 at 2077.026 kb on - strand, within MPMX20_01986 at 2077.026 kb on - strand, within MPMX20_01986 at 2077.026 kb on - strand, within MPMX20_01986 at 2077.026 kb on - strand, within MPMX20_01986 at 2077.028 kb on + strand, within MPMX20_01986 at 2077.028 kb on + strand, within MPMX20_01986 at 2077.028 kb on + strand, within MPMX20_01986 at 2077.028 kb on + strand, within MPMX20_01986 at 2077.033 kb on + strand, within MPMX20_01986 at 2077.033 kb on + strand, within MPMX20_01986 at 2077.036 kb on - strand, within MPMX20_01986 at 2077.036 kb on - strand, within MPMX20_01986 at 2077.036 kb on - strand, within MPMX20_01986 at 2077.041 kb on - strand, within MPMX20_01986 at 2077.047 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.053 kb on + strand, within MPMX20_01986 at 2077.054 kb on - strand, within MPMX20_01986 at 2077.061 kb on - strand, within MPMX20_01986 at 2077.061 kb on - strand, within MPMX20_01986 at 2077.061 kb on - strand, within MPMX20_01986 at 2077.061 kb on - strand, within MPMX20_01986 at 2077.091 kb on + strand, within MPMX20_01986 at 2077.094 kb on - strand, within MPMX20_01986 at 2077.096 kb on + strand, within MPMX20_01986 at 2077.096 kb on + strand, within MPMX20_01986 at 2077.096 kb on + strand, within MPMX20_01986 at 2077.104 kb on - strand, within MPMX20_01986 at 2077.104 kb on - strand, within MPMX20_01986 at 2077.182 kb on - strand at 2077.253 kb on + strand at 2077.323 kb on + strand at 2077.323 kb on + strand at 2077.323 kb on + strand at 2077.333 kb on - strand at 2077.365 kb on + strand at 2077.365 kb on + strand at 2077.373 kb on - strand, within MPMX20_01987 at 2077.373 kb on - strand, within MPMX20_01987 at 2077.401 kb on + strand, within MPMX20_01987 at 2077.426 kb on - strand, within MPMX20_01987 at 2077.435 kb on + strand, within MPMX20_01987 at 2077.443 kb on - strand, within MPMX20_01987 at 2077.443 kb on - strand, within MPMX20_01987 at 2077.443 kb on - strand, within MPMX20_01987 at 2077.443 kb on - strand, within MPMX20_01987 at 2077.443 kb on - strand, within MPMX20_01987 at 2077.443 kb on - strand, within MPMX20_01987 at 2077.443 kb on - strand, within MPMX20_01987 at 2077.536 kb on - strand, within MPMX20_01987 at 2077.566 kb on + strand, within MPMX20_01987 at 2077.627 kb on - strand, within MPMX20_01987 at 2077.631 kb on - strand, within MPMX20_01987 at 2077.653 kb on - strand, within MPMX20_01987 at 2077.723 kb on - strand, within MPMX20_01987 at 2077.791 kb on + strand, within MPMX20_01987 at 2077.791 kb on - strand, within MPMX20_01987 at 2077.818 kb on + strand, within MPMX20_01987 at 2077.818 kb on + strand, within MPMX20_01987 at 2077.903 kb on + strand at 2077.953 kb on + strand at 2078.021 kb on + strand at 2078.021 kb on + strand at 2078.074 kb on + strand at 2078.079 kb on + strand at 2078.082 kb on - strand at 2078.161 kb on - strand, within MPMX20_01988 at 2078.166 kb on - strand, within MPMX20_01988 at 2078.272 kb on - strand, within MPMX20_01988 at 2078.302 kb on + strand, within MPMX20_01988 at 2078.319 kb on + strand, within MPMX20_01988 at 2078.334 kb on - strand, within MPMX20_01988 at 2078.334 kb on - strand, within MPMX20_01988 at 2078.418 kb on - strand, within MPMX20_01988 at 2078.453 kb on + strand, within MPMX20_01988 at 2078.468 kb on + strand, within MPMX20_01988 at 2078.476 kb on - strand, within MPMX20_01988 at 2078.476 kb on - strand, within MPMX20_01988 at 2078.486 kb on - strand, within MPMX20_01988 at 2078.486 kb on - strand, within MPMX20_01988 at 2078.523 kb on + strand, within MPMX20_01988 at 2078.558 kb on + strand, within MPMX20_01988 at 2078.593 kb on + strand, within MPMX20_01988 at 2078.593 kb on + strand, within MPMX20_01988 at 2078.626 kb on + strand, within MPMX20_01988 at 2078.638 kb on + strand, within MPMX20_01988 at 2078.663 kb on - strand, within MPMX20_01988 at 2078.681 kb on + strand, within MPMX20_01988 at 2078.760 kb on + strand, within MPMX20_01988 at 2078.763 kb on - strand, within MPMX20_01988 at 2078.822 kb on - strand, within MPMX20_01988
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 2,076,344 + MPMX20_01986 0.17 +0.3 2,076,352 - MPMX20_01986 0.18 +1.7 2,076,369 + MPMX20_01986 0.19 -0.9 2,076,408 + MPMX20_01986 0.23 +0.5 2,076,408 + MPMX20_01986 0.23 +1.4 2,076,408 + MPMX20_01986 0.23 +1.1 2,076,408 + MPMX20_01986 0.23 -0.3 2,076,408 + MPMX20_01986 0.23 +0.1 2,076,408 + MPMX20_01986 0.23 -1.8 2,076,416 - MPMX20_01986 0.23 +0.5 2,076,416 - MPMX20_01986 0.23 -0.5 2,076,416 - MPMX20_01986 0.23 -2.6 2,076,416 - MPMX20_01986 0.23 -2.2 2,076,416 - MPMX20_01986 0.23 +0.8 2,076,416 - MPMX20_01986 0.23 +0.2 2,076,441 + MPMX20_01986 0.26 -1.1 2,076,449 - MPMX20_01986 0.27 +0.2 2,076,487 + MPMX20_01986 0.30 -1.8 2,076,495 - MPMX20_01986 0.31 -0.3 2,076,518 + MPMX20_01986 0.33 +0.2 2,076,626 + MPMX20_01986 0.43 -0.5 2,076,634 - MPMX20_01986 0.43 +0.1 2,076,634 - MPMX20_01986 0.43 +0.3 2,076,661 + MPMX20_01986 0.46 +0.8 2,076,732 - MPMX20_01986 0.52 +3.0 2,076,786 + MPMX20_01986 0.57 +0.7 2,076,796 + MPMX20_01986 0.58 -0.3 2,076,796 + MPMX20_01986 0.58 -1.9 2,076,796 + MPMX20_01986 0.58 -1.2 2,076,796 + MPMX20_01986 0.58 -0.5 2,076,796 + MPMX20_01986 0.58 -0.4 2,076,804 - MPMX20_01986 0.59 -1.9 2,076,804 - MPMX20_01986 0.59 +0.7 2,076,804 - MPMX20_01986 0.59 +0.4 2,076,804 - MPMX20_01986 0.59 +0.6 2,076,804 - MPMX20_01986 0.59 +0.6 2,076,811 + MPMX20_01986 0.59 -1.2 2,076,811 + MPMX20_01986 0.59 +1.4 2,076,811 + MPMX20_01986 0.59 +0.4 2,076,819 - MPMX20_01986 0.60 -3.5 2,076,819 - MPMX20_01986 0.60 +0.6 2,076,880 + MPMX20_01986 0.66 +0.3 2,076,880 + MPMX20_01986 0.66 -0.4 2,076,919 - MPMX20_01986 0.69 +0.5 2,076,924 - MPMX20_01986 0.70 +0.7 2,076,976 - MPMX20_01986 0.74 -1.1 2,077,018 + MPMX20_01986 0.78 -0.2 2,077,018 + MPMX20_01986 0.78 -2.5 2,077,018 + MPMX20_01986 0.78 +0.8 2,077,026 - MPMX20_01986 0.79 -1.3 2,077,026 - MPMX20_01986 0.79 +0.1 2,077,026 - MPMX20_01986 0.79 -0.3 2,077,026 - MPMX20_01986 0.79 -0.2 2,077,026 - MPMX20_01986 0.79 -3.1 2,077,028 + MPMX20_01986 0.79 +0.0 2,077,028 + MPMX20_01986 0.79 -3.1 2,077,028 + MPMX20_01986 0.79 +0.8 2,077,028 + MPMX20_01986 0.79 -0.7 2,077,033 + MPMX20_01986 0.80 -1.3 2,077,033 + MPMX20_01986 0.80 +0.8 2,077,036 - MPMX20_01986 0.80 -1.3 2,077,036 - MPMX20_01986 0.80 -0.5 2,077,036 - MPMX20_01986 0.80 -0.3 2,077,041 - MPMX20_01986 0.80 -0.7 2,077,047 + MPMX20_01986 0.81 +0.2 2,077,053 + MPMX20_01986 0.82 -1.1 2,077,053 + MPMX20_01986 0.82 -0.3 2,077,053 + MPMX20_01986 0.82 +1.1 2,077,053 + MPMX20_01986 0.82 -0.0 2,077,053 + MPMX20_01986 0.82 -3.4 2,077,053 + MPMX20_01986 0.82 -2.1 2,077,053 + MPMX20_01986 0.82 +0.8 2,077,053 + MPMX20_01986 0.82 -1.0 2,077,053 + MPMX20_01986 0.82 +0.8 2,077,053 + MPMX20_01986 0.82 -0.2 2,077,053 + MPMX20_01986 0.82 +2.8 2,077,053 + MPMX20_01986 0.82 -0.5 2,077,054 - MPMX20_01986 0.82 -0.5 2,077,061 - MPMX20_01986 0.82 -0.4 2,077,061 - MPMX20_01986 0.82 -0.7 2,077,061 - MPMX20_01986 0.82 -0.8 2,077,061 - MPMX20_01986 0.82 +1.9 2,077,091 + MPMX20_01986 0.85 +1.2 2,077,094 - MPMX20_01986 0.85 -0.4 2,077,096 + MPMX20_01986 0.85 +1.2 2,077,096 + MPMX20_01986 0.85 +0.4 2,077,096 + MPMX20_01986 0.85 -0.5 2,077,104 - MPMX20_01986 0.86 -1.6 2,077,104 - MPMX20_01986 0.86 -0.0 2,077,182 - -0.1 2,077,253 + +0.2 2,077,323 + +2.5 2,077,323 + +0.0 2,077,323 + -0.2 2,077,333 - -0.6 2,077,365 + +0.6 2,077,365 + +2.8 2,077,373 - MPMX20_01987 0.11 +0.3 2,077,373 - MPMX20_01987 0.11 +0.2 2,077,401 + MPMX20_01987 0.15 -0.6 2,077,426 - MPMX20_01987 0.20 -1.1 2,077,435 + MPMX20_01987 0.21 +2.3 2,077,443 - MPMX20_01987 0.22 -0.0 2,077,443 - MPMX20_01987 0.22 -0.8 2,077,443 - MPMX20_01987 0.22 -0.6 2,077,443 - MPMX20_01987 0.22 +0.0 2,077,443 - MPMX20_01987 0.22 -0.9 2,077,443 - MPMX20_01987 0.22 -1.1 2,077,443 - MPMX20_01987 0.22 +0.4 2,077,536 - MPMX20_01987 0.38 -0.8 2,077,566 + MPMX20_01987 0.43 -0.2 2,077,627 - MPMX20_01987 0.53 +0.4 2,077,631 - MPMX20_01987 0.54 -1.8 2,077,653 - MPMX20_01987 0.57 -0.8 2,077,723 - MPMX20_01987 0.69 -1.1 2,077,791 + MPMX20_01987 0.80 -3.1 2,077,791 - MPMX20_01987 0.80 +1.0 2,077,818 + MPMX20_01987 0.85 +1.1 2,077,818 + MPMX20_01987 0.85 +1.5 2,077,903 + +1.0 2,077,953 + +0.0 2,078,021 + +0.8 2,078,021 + -1.1 2,078,074 + +1.2 2,078,079 + +0.4 2,078,082 - +0.7 2,078,161 - MPMX20_01988 0.13 +0.2 2,078,166 - MPMX20_01988 0.13 -0.5 2,078,272 - MPMX20_01988 0.20 -1.8 2,078,302 + MPMX20_01988 0.22 +0.2 2,078,319 + MPMX20_01988 0.23 -3.4 2,078,334 - MPMX20_01988 0.24 -0.3 2,078,334 - MPMX20_01988 0.24 +0.1 2,078,418 - MPMX20_01988 0.29 -0.7 2,078,453 + MPMX20_01988 0.31 +0.8 2,078,468 + MPMX20_01988 0.32 -1.6 2,078,476 - MPMX20_01988 0.32 +0.2 2,078,476 - MPMX20_01988 0.32 -0.0 2,078,486 - MPMX20_01988 0.33 +1.6 2,078,486 - MPMX20_01988 0.33 +0.2 2,078,523 + MPMX20_01988 0.35 -3.1 2,078,558 + MPMX20_01988 0.37 -1.0 2,078,593 + MPMX20_01988 0.40 +0.2 2,078,593 + MPMX20_01988 0.40 +0.2 2,078,626 + MPMX20_01988 0.42 +1.2 2,078,638 + MPMX20_01988 0.42 -0.1 2,078,663 - MPMX20_01988 0.44 +0.7 2,078,681 + MPMX20_01988 0.45 -0.9 2,078,760 + MPMX20_01988 0.50 +2.7 2,078,763 - MPMX20_01988 0.50 +2.0 2,078,822 - MPMX20_01988 0.54 -1.9
Or see this region's nucleotide sequence