Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00121

Experiment: L-Phenylalanine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00120 and MPMX20_00121 are separated by 9 nucleotidesMPMX20_00121 and MPMX20_00122 are separated by 246 nucleotidesMPMX20_00122 and MPMX20_00123 are separated by 11 nucleotidesMPMX20_00123 and MPMX20_00124 are separated by 32 nucleotides MPMX20_00120: MPMX20_00120 - Murein hydrolase activator EnvC, at 121,593 to 122,876 _00120 MPMX20_00121: MPMX20_00121 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 122,886 to 124,430 _00121 MPMX20_00122: MPMX20_00122 - putative protein YibN, at 124,677 to 125,108 _00122 MPMX20_00123: MPMX20_00123 - Glutaredoxin 3, at 125,120 to 125,371 _00123 MPMX20_00124: MPMX20_00124 - Protein-export protein SecB, at 125,404 to 125,871 _00124 Position (kb) 122 123 124 125Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 121.904 kb on - strand, within MPMX20_00120at 121.942 kb on - strand, within MPMX20_00120at 122.032 kb on + strand, within MPMX20_00120at 122.058 kb on - strand, within MPMX20_00120at 122.147 kb on - strand, within MPMX20_00120at 122.181 kb on + strand, within MPMX20_00120at 122.181 kb on + strand, within MPMX20_00120at 122.181 kb on + strand, within MPMX20_00120at 122.192 kb on + strand, within MPMX20_00120at 122.236 kb on + strand, within MPMX20_00120at 122.244 kb on - strand, within MPMX20_00120at 122.244 kb on - strand, within MPMX20_00120at 122.278 kb on - strand, within MPMX20_00120at 122.350 kb on + strand, within MPMX20_00120at 122.370 kb on + strand, within MPMX20_00120at 122.398 kb on + strand, within MPMX20_00120at 122.471 kb on - strand, within MPMX20_00120at 122.493 kb on - strand, within MPMX20_00120at 122.493 kb on - strand, within MPMX20_00120at 122.493 kb on - strand, within MPMX20_00120at 122.633 kb on - strand, within MPMX20_00120at 122.645 kb on + strand, within MPMX20_00120at 122.652 kb on - strand, within MPMX20_00120at 122.652 kb on - strand, within MPMX20_00120at 122.663 kb on + strand, within MPMX20_00120at 122.663 kb on + strand, within MPMX20_00120at 122.666 kb on - strand, within MPMX20_00120at 122.681 kb on - strand, within MPMX20_00120at 122.689 kb on - strand, within MPMX20_00120at 122.728 kb on + strand, within MPMX20_00120at 122.772 kb on + strandat 122.772 kb on + strandat 122.805 kb on + strandat 122.805 kb on + strandat 122.813 kb on - strandat 122.819 kb on + strandat 122.921 kb on + strandat 122.929 kb on - strandat 122.938 kb on - strandat 122.983 kb on - strandat 123.000 kb on - strandat 123.021 kb on - strandat 123.047 kb on - strand, within MPMX20_00121at 123.049 kb on + strand, within MPMX20_00121at 123.057 kb on - strand, within MPMX20_00121at 123.062 kb on - strand, within MPMX20_00121at 123.093 kb on + strand, within MPMX20_00121at 123.103 kb on + strand, within MPMX20_00121at 123.147 kb on - strand, within MPMX20_00121at 123.152 kb on + strand, within MPMX20_00121at 123.152 kb on + strand, within MPMX20_00121at 123.160 kb on - strand, within MPMX20_00121at 123.160 kb on - strand, within MPMX20_00121at 123.218 kb on + strand, within MPMX20_00121at 123.218 kb on + strand, within MPMX20_00121at 123.246 kb on - strand, within MPMX20_00121at 123.294 kb on + strand, within MPMX20_00121at 123.296 kb on + strand, within MPMX20_00121at 123.296 kb on + strand, within MPMX20_00121at 123.304 kb on - strand, within MPMX20_00121at 123.314 kb on - strand, within MPMX20_00121at 123.323 kb on + strand, within MPMX20_00121at 123.331 kb on - strand, within MPMX20_00121at 123.391 kb on - strand, within MPMX20_00121at 123.441 kb on + strand, within MPMX20_00121at 123.454 kb on - strand, within MPMX20_00121at 123.484 kb on + strand, within MPMX20_00121at 123.506 kb on + strand, within MPMX20_00121at 123.533 kb on - strand, within MPMX20_00121at 123.538 kb on + strand, within MPMX20_00121at 123.551 kb on + strand, within MPMX20_00121at 123.551 kb on + strand, within MPMX20_00121at 123.611 kb on - strand, within MPMX20_00121at 123.648 kb on - strand, within MPMX20_00121at 123.648 kb on - strand, within MPMX20_00121at 123.815 kb on + strand, within MPMX20_00121at 123.815 kb on + strand, within MPMX20_00121at 123.823 kb on - strand, within MPMX20_00121at 123.825 kb on - strand, within MPMX20_00121at 123.827 kb on + strand, within MPMX20_00121at 123.855 kb on + strand, within MPMX20_00121at 123.862 kb on + strand, within MPMX20_00121at 123.870 kb on - strand, within MPMX20_00121at 123.951 kb on + strand, within MPMX20_00121at 124.016 kb on - strand, within MPMX20_00121at 124.056 kb on + strand, within MPMX20_00121at 124.074 kb on + strand, within MPMX20_00121at 124.074 kb on + strand, within MPMX20_00121at 124.077 kb on - strand, within MPMX20_00121at 124.114 kb on + strand, within MPMX20_00121at 124.114 kb on + strand, within MPMX20_00121at 124.115 kb on - strand, within MPMX20_00121at 124.117 kb on - strand, within MPMX20_00121at 124.122 kb on - strand, within MPMX20_00121at 124.122 kb on - strand, within MPMX20_00121at 124.127 kb on - strand, within MPMX20_00121at 124.127 kb on - strand, within MPMX20_00121at 124.213 kb on + strand, within MPMX20_00121at 124.227 kb on - strand, within MPMX20_00121at 124.227 kb on - strand, within MPMX20_00121at 124.279 kb on - strandat 124.291 kb on + strandat 124.299 kb on - strandat 124.315 kb on - strandat 124.370 kb on - strandat 124.379 kb on + strandat 124.387 kb on - strandat 124.406 kb on - strandat 124.443 kb on + strandat 124.530 kb on - strandat 124.531 kb on - strandat 124.596 kb on - strandat 124.596 kb on - strandat 124.596 kb on - strandat 124.624 kb on + strandat 124.624 kb on + strandat 124.624 kb on + strandat 124.624 kb on + strandat 124.624 kb on + strandat 124.624 kb on + strandat 124.624 kb on + strandat 124.624 kb on + strandat 124.625 kb on + strandat 124.625 kb on + strandat 124.625 kb on + strandat 124.625 kb on - strandat 124.630 kb on + strandat 124.632 kb on - strandat 124.632 kb on - strandat 124.632 kb on - strandat 124.632 kb on - strandat 124.632 kb on - strandat 124.632 kb on - strandat 124.632 kb on - strandat 124.632 kb on - strandat 124.632 kb on - strandat 124.633 kb on - strandat 124.633 kb on - strandat 124.665 kb on + strandat 124.713 kb on + strandat 124.713 kb on + strandat 124.713 kb on + strandat 124.744 kb on + strand, within MPMX20_00122at 124.751 kb on + strand, within MPMX20_00122at 124.754 kb on + strand, within MPMX20_00122at 124.784 kb on + strand, within MPMX20_00122at 124.792 kb on - strand, within MPMX20_00122at 124.792 kb on - strand, within MPMX20_00122at 124.796 kb on + strand, within MPMX20_00122at 124.930 kb on + strand, within MPMX20_00122at 124.949 kb on + strand, within MPMX20_00122at 124.949 kb on + strand, within MPMX20_00122at 124.957 kb on - strand, within MPMX20_00122at 124.972 kb on + strand, within MPMX20_00122at 125.018 kb on + strand, within MPMX20_00122at 125.018 kb on + strand, within MPMX20_00122at 125.018 kb on + strand, within MPMX20_00122at 125.018 kb on + strand, within MPMX20_00122at 125.018 kb on + strand, within MPMX20_00122at 125.046 kb on + strand, within MPMX20_00122at 125.057 kb on + strand, within MPMX20_00122at 125.120 kb on - strandat 125.180 kb on + strand, within MPMX20_00123at 125.316 kb on + strand, within MPMX20_00123at 125.352 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (C)
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121,904 - MPMX20_00120 0.24 -0.7
121,942 - MPMX20_00120 0.27 -0.7
122,032 + MPMX20_00120 0.34 +0.8
122,058 - MPMX20_00120 0.36 -2.3
122,147 - MPMX20_00120 0.43 -0.4
122,181 + MPMX20_00120 0.46 +0.7
122,181 + MPMX20_00120 0.46 +0.9
122,181 + MPMX20_00120 0.46 -0.0
122,192 + MPMX20_00120 0.47 -0.2
122,236 + MPMX20_00120 0.50 +0.3
122,244 - MPMX20_00120 0.51 +0.2
122,244 - MPMX20_00120 0.51 -2.5
122,278 - MPMX20_00120 0.53 -0.4
122,350 + MPMX20_00120 0.59 +0.6
122,370 + MPMX20_00120 0.61 -0.7
122,398 + MPMX20_00120 0.63 +0.4
122,471 - MPMX20_00120 0.68 +1.7
122,493 - MPMX20_00120 0.70 -1.3
122,493 - MPMX20_00120 0.70 -0.6
122,493 - MPMX20_00120 0.70 -0.8
122,633 - MPMX20_00120 0.81 +0.1
122,645 + MPMX20_00120 0.82 -1.2
122,652 - MPMX20_00120 0.82 -0.9
122,652 - MPMX20_00120 0.82 -1.5
122,663 + MPMX20_00120 0.83 -2.0
122,663 + MPMX20_00120 0.83 -1.2
122,666 - MPMX20_00120 0.84 -3.0
122,681 - MPMX20_00120 0.85 -0.7
122,689 - MPMX20_00120 0.85 +0.9
122,728 + MPMX20_00120 0.88 -2.5
122,772 + -0.4
122,772 + +0.0
122,805 + +1.9
122,805 + -0.7
122,813 - +0.8
122,819 + -1.2
122,921 + +0.8
122,929 - +0.3
122,938 - +1.2
122,983 - +0.2
123,000 - +0.9
123,021 - +1.0
123,047 - MPMX20_00121 0.10 +0.3
123,049 + MPMX20_00121 0.11 +2.1
123,057 - MPMX20_00121 0.11 -1.3
123,062 - MPMX20_00121 0.11 -0.9
123,093 + MPMX20_00121 0.13 +0.3
123,103 + MPMX20_00121 0.14 +0.5
123,147 - MPMX20_00121 0.17 +0.5
123,152 + MPMX20_00121 0.17 -1.9
123,152 + MPMX20_00121 0.17 -2.6
123,160 - MPMX20_00121 0.18 +0.1
123,160 - MPMX20_00121 0.18 -0.5
123,218 + MPMX20_00121 0.21 -1.8
123,218 + MPMX20_00121 0.21 +1.5
123,246 - MPMX20_00121 0.23 -0.1
123,294 + MPMX20_00121 0.26 -0.9
123,296 + MPMX20_00121 0.27 +1.3
123,296 + MPMX20_00121 0.27 -1.2
123,304 - MPMX20_00121 0.27 -0.5
123,314 - MPMX20_00121 0.28 +1.7
123,323 + MPMX20_00121 0.28 -0.0
123,331 - MPMX20_00121 0.29 +0.5
123,391 - MPMX20_00121 0.33 -0.1
123,441 + MPMX20_00121 0.36 -2.4
123,454 - MPMX20_00121 0.37 +1.7
123,484 + MPMX20_00121 0.39 -0.7
123,506 + MPMX20_00121 0.40 +0.7
123,533 - MPMX20_00121 0.42 +0.1
123,538 + MPMX20_00121 0.42 -0.5
123,551 + MPMX20_00121 0.43 +0.6
123,551 + MPMX20_00121 0.43 +0.8
123,611 - MPMX20_00121 0.47 +0.6
123,648 - MPMX20_00121 0.49 -2.1
123,648 - MPMX20_00121 0.49 +1.3
123,815 + MPMX20_00121 0.60 +1.0
123,815 + MPMX20_00121 0.60 +0.8
123,823 - MPMX20_00121 0.61 +0.0
123,825 - MPMX20_00121 0.61 +0.1
123,827 + MPMX20_00121 0.61 -0.5
123,855 + MPMX20_00121 0.63 +0.1
123,862 + MPMX20_00121 0.63 -2.4
123,870 - MPMX20_00121 0.64 +1.6
123,951 + MPMX20_00121 0.69 -0.1
124,016 - MPMX20_00121 0.73 +0.6
124,056 + MPMX20_00121 0.76 +2.3
124,074 + MPMX20_00121 0.77 -1.1
124,074 + MPMX20_00121 0.77 +1.6
124,077 - MPMX20_00121 0.77 +3.2
124,114 + MPMX20_00121 0.79 -1.9
124,114 + MPMX20_00121 0.79 -0.6
124,115 - MPMX20_00121 0.80 -0.9
124,117 - MPMX20_00121 0.80 +2.0
124,122 - MPMX20_00121 0.80 +0.4
124,122 - MPMX20_00121 0.80 +0.1
124,127 - MPMX20_00121 0.80 -0.7
124,127 - MPMX20_00121 0.80 -1.5
124,213 + MPMX20_00121 0.86 +0.9
124,227 - MPMX20_00121 0.87 +0.7
124,227 - MPMX20_00121 0.87 -0.9
124,279 - -0.0
124,291 + -1.0
124,299 - -0.9
124,315 - +4.4
124,370 - -0.1
124,379 + -1.3
124,387 - -0.5
124,406 - +2.5
124,443 + +0.8
124,530 - +1.1
124,531 - +0.3
124,596 - -3.1
124,596 - -0.2
124,596 - -0.7
124,624 + -0.6
124,624 + +0.2
124,624 + +0.7
124,624 + -0.0
124,624 + -0.3
124,624 + -0.2
124,624 + +0.4
124,624 + +0.0
124,625 + +0.4
124,625 + +0.6
124,625 + -0.4
124,625 - +1.1
124,630 + +1.3
124,632 - +0.4
124,632 - -0.5
124,632 - -0.5
124,632 - +0.5
124,632 - +1.7
124,632 - -1.2
124,632 - -3.6
124,632 - -2.2
124,632 - -0.2
124,633 - -0.9
124,633 - +1.3
124,665 + -3.8
124,713 + +0.4
124,713 + -0.3
124,713 + +0.5
124,744 + MPMX20_00122 0.16 -2.3
124,751 + MPMX20_00122 0.17 -0.5
124,754 + MPMX20_00122 0.18 -1.1
124,784 + MPMX20_00122 0.25 -1.1
124,792 - MPMX20_00122 0.27 -0.1
124,792 - MPMX20_00122 0.27 -1.1
124,796 + MPMX20_00122 0.28 +1.7
124,930 + MPMX20_00122 0.59 -0.1
124,949 + MPMX20_00122 0.63 -0.1
124,949 + MPMX20_00122 0.63 -0.4
124,957 - MPMX20_00122 0.65 -0.9
124,972 + MPMX20_00122 0.68 -0.1
125,018 + MPMX20_00122 0.79 -0.7
125,018 + MPMX20_00122 0.79 +0.4
125,018 + MPMX20_00122 0.79 -3.3
125,018 + MPMX20_00122 0.79 +0.0
125,018 + MPMX20_00122 0.79 -0.7
125,046 + MPMX20_00122 0.85 -0.3
125,057 + MPMX20_00122 0.88 -1.5
125,120 - -1.3
125,180 + MPMX20_00123 0.24 +0.5
125,316 + MPMX20_00123 0.78 +0.6
125,352 - -3.0

Or see this region's nucleotide sequence