Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03774

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03773 and MPMX20_03774 are separated by 47 nucleotidesMPMX20_03774 and MPMX20_03775 are separated by 91 nucleotidesMPMX20_03775 and MPMX20_03776 are separated by 146 nucleotides MPMX20_03773: MPMX20_03773 - HTH-type transcriptional regulator ArgP, at 3,976,192 to 3,977,085 _03773 MPMX20_03774: MPMX20_03774 - 26 kDa periplasmic immunogenic protein, at 3,977,133 to 3,977,873 _03774 MPMX20_03775: MPMX20_03775 - Arginine exporter protein ArgO, at 3,977,965 to 3,978,600 _03775 MPMX20_03776: MPMX20_03776 - Small-conductance mechanosensitive channel, at 3,978,747 to 3,979,601 _03776 Position (kb) 3977 3978Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 3976.206 kb on + strandat 3976.214 kb on - strandat 3976.214 kb on - strandat 3976.245 kb on + strandat 3976.280 kb on - strandat 3976.300 kb on - strand, within MPMX20_03773at 3976.300 kb on - strand, within MPMX20_03773at 3976.360 kb on - strand, within MPMX20_03773at 3976.387 kb on - strand, within MPMX20_03773at 3976.414 kb on - strand, within MPMX20_03773at 3976.414 kb on - strand, within MPMX20_03773at 3976.414 kb on - strand, within MPMX20_03773at 3976.432 kb on - strand, within MPMX20_03773at 3976.459 kb on - strand, within MPMX20_03773at 3976.459 kb on - strand, within MPMX20_03773at 3976.541 kb on + strand, within MPMX20_03773at 3976.666 kb on - strand, within MPMX20_03773at 3976.749 kb on + strand, within MPMX20_03773at 3977.060 kb on + strandat 3977.060 kb on + strandat 3977.068 kb on - strandat 3977.068 kb on - strandat 3977.079 kb on + strandat 3977.108 kb on - strandat 3977.196 kb on + strandat 3977.240 kb on + strand, within MPMX20_03774at 3977.280 kb on + strand, within MPMX20_03774at 3977.320 kb on + strand, within MPMX20_03774at 3977.343 kb on - strand, within MPMX20_03774at 3977.525 kb on + strand, within MPMX20_03774at 3977.533 kb on - strand, within MPMX20_03774at 3977.533 kb on - strand, within MPMX20_03774at 3977.611 kb on - strand, within MPMX20_03774at 3977.611 kb on - strand, within MPMX20_03774at 3977.632 kb on + strand, within MPMX20_03774at 3977.836 kb on - strandat 3977.928 kb on - strandat 3977.935 kb on - strandat 3977.949 kb on + strandat 3978.009 kb on + strandat 3978.150 kb on - strand, within MPMX20_03775at 3978.156 kb on - strand, within MPMX20_03775at 3978.176 kb on + strand, within MPMX20_03775at 3978.184 kb on - strand, within MPMX20_03775at 3978.184 kb on - strand, within MPMX20_03775at 3978.207 kb on + strand, within MPMX20_03775at 3978.207 kb on + strand, within MPMX20_03775at 3978.207 kb on - strand, within MPMX20_03775at 3978.207 kb on - strand, within MPMX20_03775at 3978.239 kb on + strand, within MPMX20_03775at 3978.247 kb on - strand, within MPMX20_03775at 3978.283 kb on - strand, within MPMX20_03775at 3978.375 kb on + strand, within MPMX20_03775at 3978.399 kb on + strand, within MPMX20_03775at 3978.456 kb on - strand, within MPMX20_03775at 3978.470 kb on + strand, within MPMX20_03775at 3978.470 kb on + strand, within MPMX20_03775at 3978.475 kb on + strand, within MPMX20_03775at 3978.488 kb on - strand, within MPMX20_03775at 3978.501 kb on + strand, within MPMX20_03775at 3978.546 kb on + strandat 3978.547 kb on + strandat 3978.623 kb on + strandat 3978.723 kb on + strandat 3978.766 kb on + strandat 3978.786 kb on - strandat 3978.793 kb on - strandat 3978.809 kb on - strandat 3978.834 kb on - strand, within MPMX20_03776at 3978.834 kb on - strand, within MPMX20_03776at 3978.837 kb on + strand, within MPMX20_03776at 3978.845 kb on - strand, within MPMX20_03776at 3978.845 kb on - strand, within MPMX20_03776

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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3,976,206 + -0.5
3,976,214 - +0.3
3,976,214 - -1.4
3,976,245 + +1.2
3,976,280 - +0.8
3,976,300 - MPMX20_03773 0.12 -0.5
3,976,300 - MPMX20_03773 0.12 -0.3
3,976,360 - MPMX20_03773 0.19 -0.1
3,976,387 - MPMX20_03773 0.22 -0.8
3,976,414 - MPMX20_03773 0.25 -2.0
3,976,414 - MPMX20_03773 0.25 -0.1
3,976,414 - MPMX20_03773 0.25 +0.8
3,976,432 - MPMX20_03773 0.27 +0.1
3,976,459 - MPMX20_03773 0.30 +0.9
3,976,459 - MPMX20_03773 0.30 +0.2
3,976,541 + MPMX20_03773 0.39 +0.6
3,976,666 - MPMX20_03773 0.53 -0.0
3,976,749 + MPMX20_03773 0.62 -4.3
3,977,060 + +2.1
3,977,060 + +0.2
3,977,068 - +0.5
3,977,068 - +0.2
3,977,079 + +0.6
3,977,108 - -0.8
3,977,196 + +0.3
3,977,240 + MPMX20_03774 0.14 -0.6
3,977,280 + MPMX20_03774 0.20 +1.8
3,977,320 + MPMX20_03774 0.25 +1.7
3,977,343 - MPMX20_03774 0.28 +0.6
3,977,525 + MPMX20_03774 0.53 +1.6
3,977,533 - MPMX20_03774 0.54 +0.1
3,977,533 - MPMX20_03774 0.54 +0.3
3,977,611 - MPMX20_03774 0.65 +0.5
3,977,611 - MPMX20_03774 0.65 -2.0
3,977,632 + MPMX20_03774 0.67 -0.6
3,977,836 - +0.2
3,977,928 - +1.8
3,977,935 - -2.4
3,977,949 + +1.6
3,978,009 + +1.2
3,978,150 - MPMX20_03775 0.29 +0.6
3,978,156 - MPMX20_03775 0.30 +0.8
3,978,176 + MPMX20_03775 0.33 -0.8
3,978,184 - MPMX20_03775 0.34 -3.2
3,978,184 - MPMX20_03775 0.34 +0.1
3,978,207 + MPMX20_03775 0.38 -0.4
3,978,207 + MPMX20_03775 0.38 -0.4
3,978,207 - MPMX20_03775 0.38 -1.1
3,978,207 - MPMX20_03775 0.38 +0.2
3,978,239 + MPMX20_03775 0.43 -0.2
3,978,247 - MPMX20_03775 0.44 +0.6
3,978,283 - MPMX20_03775 0.50 +0.8
3,978,375 + MPMX20_03775 0.64 +1.8
3,978,399 + MPMX20_03775 0.68 -0.3
3,978,456 - MPMX20_03775 0.77 +1.1
3,978,470 + MPMX20_03775 0.79 -0.8
3,978,470 + MPMX20_03775 0.79 +0.6
3,978,475 + MPMX20_03775 0.80 -0.2
3,978,488 - MPMX20_03775 0.82 -0.0
3,978,501 + MPMX20_03775 0.84 -0.0
3,978,546 + +0.5
3,978,547 + +0.4
3,978,623 + -0.6
3,978,723 + -1.5
3,978,766 + -0.8
3,978,786 - -0.7
3,978,793 - -0.1
3,978,809 - -0.1
3,978,834 - MPMX20_03776 0.10 +0.9
3,978,834 - MPMX20_03776 0.10 +0.4
3,978,837 + MPMX20_03776 0.11 +1.1
3,978,845 - MPMX20_03776 0.11 -0.9
3,978,845 - MPMX20_03776 0.11 +0.1

Or see this region's nucleotide sequence