Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03773 and MPMX20_03774 are separated by 47 nucleotides MPMX20_03774 and MPMX20_03775 are separated by 91 nucleotides MPMX20_03775 and MPMX20_03776 are separated by 146 nucleotides
MPMX20_03773: MPMX20_03773 - HTH-type transcriptional regulator ArgP, at 3,976,192 to 3,977,085
_03773
MPMX20_03774: MPMX20_03774 - 26 kDa periplasmic immunogenic protein, at 3,977,133 to 3,977,873
_03774
MPMX20_03775: MPMX20_03775 - Arginine exporter protein ArgO, at 3,977,965 to 3,978,600
_03775
MPMX20_03776: MPMX20_03776 - Small-conductance mechanosensitive channel, at 3,978,747 to 3,979,601
_03776
Position (kb)
3977
3978 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3976.206 kb on + strand at 3976.214 kb on - strand at 3976.214 kb on - strand at 3976.245 kb on + strand at 3976.280 kb on - strand at 3976.300 kb on - strand, within MPMX20_03773 at 3976.300 kb on - strand, within MPMX20_03773 at 3976.360 kb on - strand, within MPMX20_03773 at 3976.387 kb on - strand, within MPMX20_03773 at 3976.414 kb on - strand, within MPMX20_03773 at 3976.414 kb on - strand, within MPMX20_03773 at 3976.414 kb on - strand, within MPMX20_03773 at 3976.432 kb on - strand, within MPMX20_03773 at 3976.459 kb on - strand, within MPMX20_03773 at 3976.459 kb on - strand, within MPMX20_03773 at 3976.541 kb on + strand, within MPMX20_03773 at 3976.666 kb on - strand, within MPMX20_03773 at 3976.749 kb on + strand, within MPMX20_03773 at 3977.060 kb on + strand at 3977.060 kb on + strand at 3977.068 kb on - strand at 3977.068 kb on - strand at 3977.079 kb on + strand at 3977.108 kb on - strand at 3977.196 kb on + strand at 3977.240 kb on + strand, within MPMX20_03774 at 3977.280 kb on + strand, within MPMX20_03774 at 3977.320 kb on + strand, within MPMX20_03774 at 3977.343 kb on - strand, within MPMX20_03774 at 3977.525 kb on + strand, within MPMX20_03774 at 3977.533 kb on - strand, within MPMX20_03774 at 3977.533 kb on - strand, within MPMX20_03774 at 3977.611 kb on - strand, within MPMX20_03774 at 3977.611 kb on - strand, within MPMX20_03774 at 3977.632 kb on + strand, within MPMX20_03774 at 3977.836 kb on - strand at 3977.928 kb on - strand at 3977.935 kb on - strand at 3977.949 kb on + strand at 3978.009 kb on + strand at 3978.150 kb on - strand, within MPMX20_03775 at 3978.156 kb on - strand, within MPMX20_03775 at 3978.176 kb on + strand, within MPMX20_03775 at 3978.184 kb on - strand, within MPMX20_03775 at 3978.184 kb on - strand, within MPMX20_03775 at 3978.207 kb on + strand, within MPMX20_03775 at 3978.207 kb on + strand, within MPMX20_03775 at 3978.207 kb on - strand, within MPMX20_03775 at 3978.207 kb on - strand, within MPMX20_03775 at 3978.239 kb on + strand, within MPMX20_03775 at 3978.247 kb on - strand, within MPMX20_03775 at 3978.283 kb on - strand, within MPMX20_03775 at 3978.375 kb on + strand, within MPMX20_03775 at 3978.399 kb on + strand, within MPMX20_03775 at 3978.456 kb on - strand, within MPMX20_03775 at 3978.470 kb on + strand, within MPMX20_03775 at 3978.470 kb on + strand, within MPMX20_03775 at 3978.475 kb on + strand, within MPMX20_03775 at 3978.488 kb on - strand, within MPMX20_03775 at 3978.501 kb on + strand, within MPMX20_03775 at 3978.546 kb on + strand at 3978.547 kb on + strand at 3978.623 kb on + strand at 3978.723 kb on + strand at 3978.766 kb on + strand at 3978.786 kb on - strand at 3978.793 kb on - strand at 3978.809 kb on - strand at 3978.834 kb on - strand, within MPMX20_03776 at 3978.834 kb on - strand, within MPMX20_03776 at 3978.837 kb on + strand, within MPMX20_03776 at 3978.845 kb on - strand, within MPMX20_03776 at 3978.845 kb on - strand, within MPMX20_03776
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 3,976,206 + -0.5 3,976,214 - +0.3 3,976,214 - -1.4 3,976,245 + +1.2 3,976,280 - +0.8 3,976,300 - MPMX20_03773 0.12 -0.5 3,976,300 - MPMX20_03773 0.12 -0.3 3,976,360 - MPMX20_03773 0.19 -0.1 3,976,387 - MPMX20_03773 0.22 -0.8 3,976,414 - MPMX20_03773 0.25 -2.0 3,976,414 - MPMX20_03773 0.25 -0.1 3,976,414 - MPMX20_03773 0.25 +0.8 3,976,432 - MPMX20_03773 0.27 +0.1 3,976,459 - MPMX20_03773 0.30 +0.9 3,976,459 - MPMX20_03773 0.30 +0.2 3,976,541 + MPMX20_03773 0.39 +0.6 3,976,666 - MPMX20_03773 0.53 -0.0 3,976,749 + MPMX20_03773 0.62 -4.3 3,977,060 + +2.1 3,977,060 + +0.2 3,977,068 - +0.5 3,977,068 - +0.2 3,977,079 + +0.6 3,977,108 - -0.8 3,977,196 + +0.3 3,977,240 + MPMX20_03774 0.14 -0.6 3,977,280 + MPMX20_03774 0.20 +1.8 3,977,320 + MPMX20_03774 0.25 +1.7 3,977,343 - MPMX20_03774 0.28 +0.6 3,977,525 + MPMX20_03774 0.53 +1.6 3,977,533 - MPMX20_03774 0.54 +0.1 3,977,533 - MPMX20_03774 0.54 +0.3 3,977,611 - MPMX20_03774 0.65 +0.5 3,977,611 - MPMX20_03774 0.65 -2.0 3,977,632 + MPMX20_03774 0.67 -0.6 3,977,836 - +0.2 3,977,928 - +1.8 3,977,935 - -2.4 3,977,949 + +1.6 3,978,009 + +1.2 3,978,150 - MPMX20_03775 0.29 +0.6 3,978,156 - MPMX20_03775 0.30 +0.8 3,978,176 + MPMX20_03775 0.33 -0.8 3,978,184 - MPMX20_03775 0.34 -3.2 3,978,184 - MPMX20_03775 0.34 +0.1 3,978,207 + MPMX20_03775 0.38 -0.4 3,978,207 + MPMX20_03775 0.38 -0.4 3,978,207 - MPMX20_03775 0.38 -1.1 3,978,207 - MPMX20_03775 0.38 +0.2 3,978,239 + MPMX20_03775 0.43 -0.2 3,978,247 - MPMX20_03775 0.44 +0.6 3,978,283 - MPMX20_03775 0.50 +0.8 3,978,375 + MPMX20_03775 0.64 +1.8 3,978,399 + MPMX20_03775 0.68 -0.3 3,978,456 - MPMX20_03775 0.77 +1.1 3,978,470 + MPMX20_03775 0.79 -0.8 3,978,470 + MPMX20_03775 0.79 +0.6 3,978,475 + MPMX20_03775 0.80 -0.2 3,978,488 - MPMX20_03775 0.82 -0.0 3,978,501 + MPMX20_03775 0.84 -0.0 3,978,546 + +0.5 3,978,547 + +0.4 3,978,623 + -0.6 3,978,723 + -1.5 3,978,766 + -0.8 3,978,786 - -0.7 3,978,793 - -0.1 3,978,809 - -0.1 3,978,834 - MPMX20_03776 0.10 +0.9 3,978,834 - MPMX20_03776 0.10 +0.4 3,978,837 + MPMX20_03776 0.11 +1.1 3,978,845 - MPMX20_03776 0.11 -0.9 3,978,845 - MPMX20_03776 0.11 +0.1
Or see this region's nucleotide sequence