Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03698 and MPMX20_03699 are separated by 424 nucleotides MPMX20_03699 and MPMX20_03700 overlap by 40 nucleotides MPMX20_03700 and MPMX20_03701 overlap by 4 nucleotides
MPMX20_03698: MPMX20_03698 - Bifunctional protein Aas, at 3,897,534 to 3,899,693
_03698
MPMX20_03699: MPMX20_03699 - HTH-type transcriptional regulator GalR, at 3,900,118 to 3,901,134
_03699
MPMX20_03700: MPMX20_03700 - hypothetical protein, at 3,901,095 to 3,901,571
_03700
MPMX20_03701: MPMX20_03701 - Glc operon transcriptional activator, at 3,901,568 to 3,902,341
_03701
Position (kb)
3900
3901
3902 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3899.305 kb on + strand, within MPMX20_03698 at 3899.403 kb on + strand, within MPMX20_03698 at 3899.499 kb on - strand at 3899.519 kb on - strand at 3899.621 kb on + strand at 3899.677 kb on - strand at 3899.693 kb on + strand at 3899.730 kb on + strand at 3899.820 kb on - strand at 3899.820 kb on - strand at 3899.830 kb on - strand at 3899.859 kb on + strand at 3899.866 kb on + strand at 3899.883 kb on + strand at 3899.926 kb on + strand at 3899.965 kb on + strand at 3900.003 kb on + strand at 3900.003 kb on + strand at 3900.029 kb on + strand at 3900.191 kb on + strand at 3900.200 kb on - strand at 3900.288 kb on - strand, within MPMX20_03699 at 3900.300 kb on - strand, within MPMX20_03699 at 3900.305 kb on + strand, within MPMX20_03699 at 3900.307 kb on - strand, within MPMX20_03699 at 3900.364 kb on - strand, within MPMX20_03699 at 3900.447 kb on + strand, within MPMX20_03699 at 3900.464 kb on + strand, within MPMX20_03699 at 3900.464 kb on + strand, within MPMX20_03699 at 3900.528 kb on + strand, within MPMX20_03699 at 3900.634 kb on + strand, within MPMX20_03699 at 3900.655 kb on + strand, within MPMX20_03699 at 3900.663 kb on - strand, within MPMX20_03699 at 3900.696 kb on - strand, within MPMX20_03699 at 3900.713 kb on + strand, within MPMX20_03699 at 3900.718 kb on - strand, within MPMX20_03699 at 3900.770 kb on + strand, within MPMX20_03699 at 3900.803 kb on - strand, within MPMX20_03699 at 3900.803 kb on - strand, within MPMX20_03699 at 3900.845 kb on + strand, within MPMX20_03699 at 3900.896 kb on + strand, within MPMX20_03699 at 3900.948 kb on - strand, within MPMX20_03699 at 3900.967 kb on + strand, within MPMX20_03699 at 3901.066 kb on + strand at 3901.071 kb on + strand at 3901.071 kb on + strand at 3901.081 kb on + strand at 3901.092 kb on + strand at 3901.122 kb on - strand at 3901.210 kb on - strand, within MPMX20_03700 at 3901.243 kb on + strand, within MPMX20_03700 at 3901.251 kb on - strand, within MPMX20_03700 at 3901.401 kb on - strand, within MPMX20_03700 at 3901.415 kb on + strand, within MPMX20_03700 at 3901.439 kb on + strand, within MPMX20_03700 at 3901.445 kb on + strand, within MPMX20_03700 at 3901.537 kb on - strand at 3901.566 kb on + strand at 3901.574 kb on - strand at 3901.631 kb on + strand at 3901.645 kb on + strand at 3901.716 kb on - strand, within MPMX20_03701 at 3901.776 kb on - strand, within MPMX20_03701 at 3901.781 kb on + strand, within MPMX20_03701 at 3901.836 kb on + strand, within MPMX20_03701 at 3901.836 kb on + strand, within MPMX20_03701 at 3901.837 kb on + strand, within MPMX20_03701 at 3901.843 kb on - strand, within MPMX20_03701 at 3901.877 kb on + strand, within MPMX20_03701 at 3901.880 kb on - strand, within MPMX20_03701 at 3902.046 kb on + strand, within MPMX20_03701 at 3902.125 kb on + strand, within MPMX20_03701
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 3,899,305 + MPMX20_03698 0.82 -0.6 3,899,403 + MPMX20_03698 0.87 +0.4 3,899,499 - +0.4 3,899,519 - -2.9 3,899,621 + -0.3 3,899,677 - -0.4 3,899,693 + -0.3 3,899,730 + -0.1 3,899,820 - -0.1 3,899,820 - +0.3 3,899,830 - +1.8 3,899,859 + +2.0 3,899,866 + -0.6 3,899,883 + +0.1 3,899,926 + -1.5 3,899,965 + -0.3 3,900,003 + +0.1 3,900,003 + +0.2 3,900,029 + -0.5 3,900,191 + -1.3 3,900,200 - -1.3 3,900,288 - MPMX20_03699 0.17 -1.2 3,900,300 - MPMX20_03699 0.18 +1.3 3,900,305 + MPMX20_03699 0.18 -1.9 3,900,307 - MPMX20_03699 0.19 -2.1 3,900,364 - MPMX20_03699 0.24 +0.0 3,900,447 + MPMX20_03699 0.32 -1.4 3,900,464 + MPMX20_03699 0.34 -0.5 3,900,464 + MPMX20_03699 0.34 -2.0 3,900,528 + MPMX20_03699 0.40 -1.4 3,900,634 + MPMX20_03699 0.51 -1.7 3,900,655 + MPMX20_03699 0.53 -2.6 3,900,663 - MPMX20_03699 0.54 -1.0 3,900,696 - MPMX20_03699 0.57 -2.3 3,900,713 + MPMX20_03699 0.59 -1.0 3,900,718 - MPMX20_03699 0.59 +0.2 3,900,770 + MPMX20_03699 0.64 -1.4 3,900,803 - MPMX20_03699 0.67 -1.4 3,900,803 - MPMX20_03699 0.67 -0.2 3,900,845 + MPMX20_03699 0.71 -2.0 3,900,896 + MPMX20_03699 0.76 -0.7 3,900,948 - MPMX20_03699 0.82 -0.2 3,900,967 + MPMX20_03699 0.83 -0.5 3,901,066 + -1.4 3,901,071 + +1.7 3,901,071 + -1.2 3,901,081 + -2.5 3,901,092 + -1.9 3,901,122 - +1.1 3,901,210 - MPMX20_03700 0.24 -1.0 3,901,243 + MPMX20_03700 0.31 +0.0 3,901,251 - MPMX20_03700 0.33 +0.1 3,901,401 - MPMX20_03700 0.64 -0.3 3,901,415 + MPMX20_03700 0.67 +0.4 3,901,439 + MPMX20_03700 0.72 +0.5 3,901,445 + MPMX20_03700 0.73 -1.3 3,901,537 - -1.3 3,901,566 + +0.1 3,901,574 - +1.3 3,901,631 + +0.4 3,901,645 + +0.2 3,901,716 - MPMX20_03701 0.19 +0.6 3,901,776 - MPMX20_03701 0.27 +0.8 3,901,781 + MPMX20_03701 0.28 +0.1 3,901,836 + MPMX20_03701 0.35 +0.1 3,901,836 + MPMX20_03701 0.35 +0.0 3,901,837 + MPMX20_03701 0.35 +1.3 3,901,843 - MPMX20_03701 0.36 -0.1 3,901,877 + MPMX20_03701 0.40 +0.1 3,901,880 - MPMX20_03701 0.40 +0.4 3,902,046 + MPMX20_03701 0.62 +0.1 3,902,125 + MPMX20_03701 0.72 -0.4
Or see this region's nucleotide sequence