Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00420

Experiment: L-Histidine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00419 and MPMX20_00420 are separated by 335 nucleotidesMPMX20_00420 and MPMX20_00421 are separated by 42 nucleotides MPMX20_00419: MPMX20_00419 - Aspartate ammonia-lyase, at 435,222 to 436,658 _00419 MPMX20_00420: MPMX20_00420 - hypothetical protein, at 436,994 to 437,458 _00420 MPMX20_00421: MPMX20_00421 - L-methionine/branched-chain amino acid exporter YjeH, at 437,501 to 438,739 _00421 Position (kb) 436 437 438Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3 4at 435.997 kb on - strand, within MPMX20_00419at 435.997 kb on - strand, within MPMX20_00419at 435.997 kb on - strand, within MPMX20_00419at 435.997 kb on - strand, within MPMX20_00419at 435.997 kb on - strand, within MPMX20_00419at 436.096 kb on - strand, within MPMX20_00419at 436.127 kb on - strand, within MPMX20_00419at 436.154 kb on + strand, within MPMX20_00419at 436.154 kb on + strand, within MPMX20_00419at 436.162 kb on - strand, within MPMX20_00419at 436.185 kb on + strand, within MPMX20_00419at 436.185 kb on + strand, within MPMX20_00419at 436.185 kb on + strand, within MPMX20_00419at 436.185 kb on + strand, within MPMX20_00419at 436.185 kb on + strand, within MPMX20_00419at 436.185 kb on + strand, within MPMX20_00419at 436.193 kb on - strand, within MPMX20_00419at 436.193 kb on - strand, within MPMX20_00419at 436.209 kb on + strand, within MPMX20_00419at 436.213 kb on + strand, within MPMX20_00419at 436.271 kb on + strand, within MPMX20_00419at 436.272 kb on + strand, within MPMX20_00419at 436.306 kb on - strand, within MPMX20_00419at 436.306 kb on - strand, within MPMX20_00419at 436.306 kb on - strand, within MPMX20_00419at 436.327 kb on - strand, within MPMX20_00419at 436.330 kb on - strand, within MPMX20_00419at 436.375 kb on + strand, within MPMX20_00419at 436.404 kb on + strand, within MPMX20_00419at 436.412 kb on - strand, within MPMX20_00419at 436.588 kb on + strandat 436.588 kb on + strandat 436.596 kb on - strandat 436.637 kb on - strandat 436.656 kb on + strandat 436.664 kb on - strandat 436.690 kb on + strandat 436.698 kb on - strandat 436.715 kb on + strandat 436.745 kb on - strandat 436.777 kb on - strandat 436.779 kb on + strandat 436.779 kb on + strandat 436.793 kb on + strandat 436.793 kb on + strandat 436.793 kb on + strandat 436.816 kb on - strandat 436.853 kb on - strandat 436.913 kb on + strandat 436.949 kb on + strandat 436.949 kb on + strandat 436.949 kb on + strandat 436.949 kb on + strandat 436.949 kb on + strandat 436.949 kb on + strandat 436.949 kb on + strandat 436.949 kb on + strandat 436.949 kb on + strandat 436.949 kb on + strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.957 kb on - strandat 436.961 kb on + strandat 436.961 kb on + strandat 436.961 kb on + strandat 436.961 kb on + strandat 436.969 kb on - strandat 436.969 kb on - strandat 436.969 kb on - strandat 436.969 kb on - strandat 436.976 kb on + strandat 436.984 kb on + strandat 436.984 kb on + strandat 436.992 kb on - strandat 436.992 kb on - strandat 436.992 kb on - strandat 437.064 kb on + strand, within MPMX20_00420at 437.064 kb on + strand, within MPMX20_00420at 437.064 kb on + strand, within MPMX20_00420at 437.064 kb on + strand, within MPMX20_00420at 437.064 kb on + strand, within MPMX20_00420at 437.064 kb on + strand, within MPMX20_00420at 437.064 kb on + strand, within MPMX20_00420at 437.064 kb on + strand, within MPMX20_00420at 437.064 kb on + strand, within MPMX20_00420at 437.064 kb on + strand, within MPMX20_00420at 437.064 kb on + strand, within MPMX20_00420at 437.064 kb on + strand, within MPMX20_00420at 437.064 kb on + strand, within MPMX20_00420at 437.064 kb on + strand, within MPMX20_00420at 437.064 kb on + strand, within MPMX20_00420at 437.064 kb on + strand, within MPMX20_00420at 437.072 kb on - strand, within MPMX20_00420at 437.072 kb on - strand, within MPMX20_00420at 437.072 kb on - strand, within MPMX20_00420at 437.072 kb on - strand, within MPMX20_00420at 437.072 kb on - strand, within MPMX20_00420at 437.072 kb on - strand, within MPMX20_00420at 437.072 kb on - strand, within MPMX20_00420at 437.072 kb on - strand, within MPMX20_00420at 437.072 kb on - strand, within MPMX20_00420at 437.072 kb on - strand, within MPMX20_00420at 437.072 kb on - strand, within MPMX20_00420at 437.076 kb on - strand, within MPMX20_00420at 437.076 kb on - strand, within MPMX20_00420at 437.268 kb on - strand, within MPMX20_00420at 437.270 kb on + strand, within MPMX20_00420at 437.362 kb on - strand, within MPMX20_00420at 437.374 kb on - strand, within MPMX20_00420at 437.378 kb on + strand, within MPMX20_00420at 437.381 kb on - strand, within MPMX20_00420at 437.415 kb on + strandat 437.418 kb on - strandat 437.418 kb on - strandat 437.423 kb on - strandat 437.423 kb on - strandat 437.466 kb on - strandat 437.476 kb on - strandat 437.494 kb on - strandat 437.506 kb on - strandat 437.607 kb on + strandat 437.637 kb on + strand, within MPMX20_00421at 437.652 kb on - strand, within MPMX20_00421at 437.671 kb on + strand, within MPMX20_00421at 437.713 kb on + strand, within MPMX20_00421at 437.730 kb on - strand, within MPMX20_00421at 437.745 kb on - strand, within MPMX20_00421at 437.763 kb on + strand, within MPMX20_00421at 437.776 kb on - strand, within MPMX20_00421at 437.776 kb on - strand, within MPMX20_00421at 437.786 kb on - strand, within MPMX20_00421at 437.786 kb on - strand, within MPMX20_00421at 437.805 kb on + strand, within MPMX20_00421at 437.805 kb on + strand, within MPMX20_00421at 437.805 kb on + strand, within MPMX20_00421at 437.813 kb on - strand, within MPMX20_00421at 437.848 kb on + strand, within MPMX20_00421at 437.853 kb on + strand, within MPMX20_00421at 437.858 kb on + strand, within MPMX20_00421at 437.863 kb on + strand, within MPMX20_00421at 437.873 kb on + strand, within MPMX20_00421at 437.881 kb on - strand, within MPMX20_00421at 437.896 kb on + strand, within MPMX20_00421at 438.031 kb on + strand, within MPMX20_00421at 438.033 kb on + strand, within MPMX20_00421at 438.033 kb on + strand, within MPMX20_00421at 438.033 kb on + strand, within MPMX20_00421at 438.041 kb on - strand, within MPMX20_00421at 438.041 kb on - strand, within MPMX20_00421at 438.057 kb on + strand, within MPMX20_00421at 438.057 kb on + strand, within MPMX20_00421at 438.065 kb on - strand, within MPMX20_00421at 438.136 kb on + strand, within MPMX20_00421at 438.136 kb on + strand, within MPMX20_00421at 438.144 kb on - strand, within MPMX20_00421at 438.202 kb on + strand, within MPMX20_00421at 438.210 kb on - strand, within MPMX20_00421at 438.220 kb on - strand, within MPMX20_00421at 438.321 kb on - strand, within MPMX20_00421at 438.321 kb on - strand, within MPMX20_00421at 438.433 kb on - strand, within MPMX20_00421at 438.433 kb on - strand, within MPMX20_00421

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (C)
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435,997 - MPMX20_00419 0.54 -0.1
435,997 - MPMX20_00419 0.54 -2.2
435,997 - MPMX20_00419 0.54 -0.9
435,997 - MPMX20_00419 0.54 -1.7
435,997 - MPMX20_00419 0.54 -4.7
436,096 - MPMX20_00419 0.61 -0.4
436,127 - MPMX20_00419 0.63 -0.1
436,154 + MPMX20_00419 0.65 -3.0
436,154 + MPMX20_00419 0.65 -3.3
436,162 - MPMX20_00419 0.65 -1.3
436,185 + MPMX20_00419 0.67 -1.7
436,185 + MPMX20_00419 0.67 -2.8
436,185 + MPMX20_00419 0.67 -4.4
436,185 + MPMX20_00419 0.67 -3.8
436,185 + MPMX20_00419 0.67 -1.5
436,185 + MPMX20_00419 0.67 -1.1
436,193 - MPMX20_00419 0.68 -1.5
436,193 - MPMX20_00419 0.68 -4.0
436,209 + MPMX20_00419 0.69 -2.7
436,213 + MPMX20_00419 0.69 -4.9
436,271 + MPMX20_00419 0.73 -3.4
436,272 + MPMX20_00419 0.73 -2.5
436,306 - MPMX20_00419 0.75 -2.3
436,306 - MPMX20_00419 0.75 -1.1
436,306 - MPMX20_00419 0.75 -2.9
436,327 - MPMX20_00419 0.77 -3.4
436,330 - MPMX20_00419 0.77 -3.8
436,375 + MPMX20_00419 0.80 -4.8
436,404 + MPMX20_00419 0.82 -0.9
436,412 - MPMX20_00419 0.83 -0.9
436,588 + -3.2
436,588 + -4.4
436,596 - -3.3
436,637 - -2.4
436,656 + -2.4
436,664 - +2.5
436,690 + -2.5
436,698 - -0.8
436,715 + -2.9
436,745 - +0.1
436,777 - +0.3
436,779 + +1.3
436,779 + +3.8
436,793 + -0.0
436,793 + -1.3
436,793 + -1.8
436,816 - +1.3
436,853 - +0.4
436,913 + -0.9
436,949 + +0.1
436,949 + +0.2
436,949 + +0.7
436,949 + +0.8
436,949 + +0.1
436,949 + +1.4
436,949 + +1.0
436,949 + +1.0
436,949 + +0.6
436,949 + +1.4
436,957 - -0.4
436,957 - +0.2
436,957 - +0.8
436,957 - -0.1
436,957 - -0.7
436,957 - -0.4
436,957 - +0.1
436,957 - -0.6
436,957 - +0.2
436,957 - -1.1
436,957 - -0.2
436,957 - -0.5
436,957 - +0.0
436,957 - -0.2
436,957 - -0.4
436,957 - -1.0
436,957 - +0.6
436,957 - +0.3
436,957 - -0.2
436,961 + +0.2
436,961 + +0.4
436,961 + +1.0
436,961 + -1.1
436,969 - +1.4
436,969 - -0.2
436,969 - -0.7
436,969 - -0.5
436,976 + +0.9
436,984 + +0.1
436,984 + -0.2
436,992 - -0.1
436,992 - +0.2
436,992 - -0.5
437,064 + MPMX20_00420 0.15 +0.2
437,064 + MPMX20_00420 0.15 -0.7
437,064 + MPMX20_00420 0.15 -0.2
437,064 + MPMX20_00420 0.15 +0.1
437,064 + MPMX20_00420 0.15 +0.2
437,064 + MPMX20_00420 0.15 +0.1
437,064 + MPMX20_00420 0.15 -0.1
437,064 + MPMX20_00420 0.15 -0.7
437,064 + MPMX20_00420 0.15 -1.2
437,064 + MPMX20_00420 0.15 -0.3
437,064 + MPMX20_00420 0.15 -0.9
437,064 + MPMX20_00420 0.15 -0.7
437,064 + MPMX20_00420 0.15 +0.3
437,064 + MPMX20_00420 0.15 +0.0
437,064 + MPMX20_00420 0.15 -1.4
437,064 + MPMX20_00420 0.15 +0.0
437,072 - MPMX20_00420 0.17 -0.7
437,072 - MPMX20_00420 0.17 +0.5
437,072 - MPMX20_00420 0.17 -0.4
437,072 - MPMX20_00420 0.17 -0.2
437,072 - MPMX20_00420 0.17 -0.9
437,072 - MPMX20_00420 0.17 +1.0
437,072 - MPMX20_00420 0.17 +0.5
437,072 - MPMX20_00420 0.17 -0.5
437,072 - MPMX20_00420 0.17 +0.7
437,072 - MPMX20_00420 0.17 -1.0
437,072 - MPMX20_00420 0.17 -1.1
437,076 - MPMX20_00420 0.18 -0.3
437,076 - MPMX20_00420 0.18 -0.3
437,268 - MPMX20_00420 0.59 -2.3
437,270 + MPMX20_00420 0.59 -0.9
437,362 - MPMX20_00420 0.79 +0.6
437,374 - MPMX20_00420 0.82 -1.7
437,378 + MPMX20_00420 0.83 +0.3
437,381 - MPMX20_00420 0.83 -1.4
437,415 + +0.4
437,418 - -2.0
437,418 - +0.5
437,423 - +0.8
437,423 - +0.8
437,466 - -1.3
437,476 - -2.5
437,494 - +0.3
437,506 - -0.5
437,607 + +0.3
437,637 + MPMX20_00421 0.11 +0.3
437,652 - MPMX20_00421 0.12 +0.9
437,671 + MPMX20_00421 0.14 -0.4
437,713 + MPMX20_00421 0.17 -0.0
437,730 - MPMX20_00421 0.18 +0.2
437,745 - MPMX20_00421 0.20 +0.9
437,763 + MPMX20_00421 0.21 +0.1
437,776 - MPMX20_00421 0.22 +0.6
437,776 - MPMX20_00421 0.22 +0.5
437,786 - MPMX20_00421 0.23 +0.6
437,786 - MPMX20_00421 0.23 +0.4
437,805 + MPMX20_00421 0.25 -0.7
437,805 + MPMX20_00421 0.25 +0.8
437,805 + MPMX20_00421 0.25 -0.3
437,813 - MPMX20_00421 0.25 -0.1
437,848 + MPMX20_00421 0.28 -0.2
437,853 + MPMX20_00421 0.28 +0.8
437,858 + MPMX20_00421 0.29 +0.6
437,863 + MPMX20_00421 0.29 +0.2
437,873 + MPMX20_00421 0.30 -1.4
437,881 - MPMX20_00421 0.31 -0.0
437,896 + MPMX20_00421 0.32 +0.2
438,031 + MPMX20_00421 0.43 -0.5
438,033 + MPMX20_00421 0.43 +0.2
438,033 + MPMX20_00421 0.43 -1.1
438,033 + MPMX20_00421 0.43 +0.1
438,041 - MPMX20_00421 0.44 +0.4
438,041 - MPMX20_00421 0.44 -0.5
438,057 + MPMX20_00421 0.45 -1.0
438,057 + MPMX20_00421 0.45 +0.3
438,065 - MPMX20_00421 0.46 +0.4
438,136 + MPMX20_00421 0.51 +1.1
438,136 + MPMX20_00421 0.51 -0.6
438,144 - MPMX20_00421 0.52 -1.1
438,202 + MPMX20_00421 0.57 -0.1
438,210 - MPMX20_00421 0.57 -0.6
438,220 - MPMX20_00421 0.58 +0.9
438,321 - MPMX20_00421 0.66 -0.9
438,321 - MPMX20_00421 0.66 +1.4
438,433 - MPMX20_00421 0.75 +2.5
438,433 - MPMX20_00421 0.75 -0.1

Or see this region's nucleotide sequence