Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00696

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00695 and MPMX20_00696 are separated by 58 nucleotidesMPMX20_00696 and MPMX20_00697 are separated by 108 nucleotides MPMX20_00695: MPMX20_00695 - Trifunctional NAD biosynthesis/regulator protein NadR, at 714,824 to 716,056 _00695 MPMX20_00696: MPMX20_00696 - Zinc-type alcohol dehydrogenase-like protein, at 716,115 to 717,116 _00696 MPMX20_00697: MPMX20_00697 - HTH-type transcriptional regulator PgrR, at 717,225 to 718,124 _00697 Position (kb) 716 717 718Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 715.145 kb on - strand, within MPMX20_00695at 715.145 kb on - strand, within MPMX20_00695at 715.220 kb on - strand, within MPMX20_00695at 715.260 kb on + strand, within MPMX20_00695at 715.260 kb on + strand, within MPMX20_00695at 715.275 kb on - strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.289 kb on - strand, within MPMX20_00695at 715.289 kb on - strand, within MPMX20_00695at 715.289 kb on - strand, within MPMX20_00695at 715.289 kb on - strand, within MPMX20_00695at 715.289 kb on - strand, within MPMX20_00695at 715.289 kb on - strand, within MPMX20_00695at 715.289 kb on - strand, within MPMX20_00695at 715.289 kb on - strand, within MPMX20_00695at 715.294 kb on + strand, within MPMX20_00695at 715.346 kb on + strand, within MPMX20_00695at 715.353 kb on + strand, within MPMX20_00695at 715.353 kb on + strand, within MPMX20_00695at 715.353 kb on - strand, within MPMX20_00695at 715.354 kb on - strand, within MPMX20_00695at 715.361 kb on - strand, within MPMX20_00695at 715.361 kb on - strand, within MPMX20_00695at 715.371 kb on - strand, within MPMX20_00695at 715.436 kb on - strand, within MPMX20_00695at 715.476 kb on + strand, within MPMX20_00695at 715.524 kb on + strand, within MPMX20_00695at 715.607 kb on + strand, within MPMX20_00695at 715.609 kb on + strand, within MPMX20_00695at 715.626 kb on - strand, within MPMX20_00695at 715.629 kb on + strand, within MPMX20_00695at 715.634 kb on + strand, within MPMX20_00695at 715.637 kb on - strand, within MPMX20_00695at 715.642 kb on - strand, within MPMX20_00695at 715.660 kb on + strand, within MPMX20_00695at 715.692 kb on + strand, within MPMX20_00695at 715.692 kb on + strand, within MPMX20_00695at 715.766 kb on + strand, within MPMX20_00695at 715.774 kb on - strand, within MPMX20_00695at 715.932 kb on - strand, within MPMX20_00695at 715.991 kb on + strandat 715.999 kb on - strandat 716.009 kb on - strandat 716.016 kb on + strandat 716.016 kb on + strandat 716.016 kb on + strandat 716.016 kb on + strandat 716.016 kb on + strandat 716.016 kb on + strandat 716.016 kb on + strandat 716.016 kb on + strandat 716.016 kb on + strandat 716.024 kb on - strandat 716.024 kb on - strandat 716.024 kb on - strandat 716.024 kb on - strandat 716.065 kb on + strandat 716.065 kb on + strandat 716.073 kb on - strandat 716.073 kb on - strandat 716.073 kb on - strandat 716.073 kb on - strandat 716.113 kb on + strandat 716.113 kb on + strandat 716.297 kb on + strand, within MPMX20_00696at 716.313 kb on - strand, within MPMX20_00696at 716.405 kb on - strand, within MPMX20_00696at 716.506 kb on + strand, within MPMX20_00696at 716.559 kb on - strand, within MPMX20_00696at 716.566 kb on + strand, within MPMX20_00696at 716.574 kb on - strand, within MPMX20_00696at 716.593 kb on + strand, within MPMX20_00696at 716.636 kb on + strand, within MPMX20_00696at 716.644 kb on - strand, within MPMX20_00696at 716.773 kb on - strand, within MPMX20_00696at 716.818 kb on + strand, within MPMX20_00696at 716.818 kb on - strand, within MPMX20_00696at 716.881 kb on - strand, within MPMX20_00696at 716.888 kb on + strand, within MPMX20_00696at 716.896 kb on - strand, within MPMX20_00696at 717.015 kb on - strand, within MPMX20_00696at 717.084 kb on + strandat 717.102 kb on + strandat 717.110 kb on - strandat 717.125 kb on + strandat 717.133 kb on - strandat 717.152 kb on - strandat 717.163 kb on + strandat 717.163 kb on + strandat 717.242 kb on + strandat 717.262 kb on - strandat 717.265 kb on + strandat 717.265 kb on + strandat 717.265 kb on + strandat 717.265 kb on + strandat 717.265 kb on + strandat 717.273 kb on - strandat 717.273 kb on - strandat 717.357 kb on + strand, within MPMX20_00697at 717.365 kb on - strand, within MPMX20_00697at 717.391 kb on + strand, within MPMX20_00697at 717.391 kb on + strand, within MPMX20_00697at 717.494 kb on + strand, within MPMX20_00697at 717.494 kb on + strand, within MPMX20_00697at 717.517 kb on - strand, within MPMX20_00697at 717.566 kb on + strand, within MPMX20_00697at 717.588 kb on - strand, within MPMX20_00697at 717.647 kb on - strand, within MPMX20_00697at 717.661 kb on + strand, within MPMX20_00697at 717.711 kb on - strand, within MPMX20_00697at 717.742 kb on - strand, within MPMX20_00697at 717.742 kb on - strand, within MPMX20_00697at 717.801 kb on - strand, within MPMX20_00697at 717.811 kb on + strand, within MPMX20_00697at 717.811 kb on + strand, within MPMX20_00697at 717.816 kb on + strand, within MPMX20_00697at 717.855 kb on - strand, within MPMX20_00697at 717.855 kb on - strand, within MPMX20_00697at 717.868 kb on - strand, within MPMX20_00697at 717.877 kb on + strand, within MPMX20_00697at 717.977 kb on + strand, within MPMX20_00697at 717.977 kb on + strand, within MPMX20_00697at 717.977 kb on + strand, within MPMX20_00697at 717.985 kb on - strand, within MPMX20_00697at 718.025 kb on + strand, within MPMX20_00697at 718.033 kb on - strand, within MPMX20_00697at 718.090 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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715,145 - MPMX20_00695 0.26 -1.7
715,145 - MPMX20_00695 0.26 +0.5
715,220 - MPMX20_00695 0.32 +0.7
715,260 + MPMX20_00695 0.35 +0.9
715,260 + MPMX20_00695 0.35 -2.8
715,275 - MPMX20_00695 0.37 +0.7
715,281 + MPMX20_00695 0.37 -0.0
715,281 + MPMX20_00695 0.37 +2.0
715,281 + MPMX20_00695 0.37 +2.0
715,281 + MPMX20_00695 0.37 -0.6
715,281 + MPMX20_00695 0.37 +1.4
715,281 + MPMX20_00695 0.37 -0.3
715,281 + MPMX20_00695 0.37 +2.7
715,281 + MPMX20_00695 0.37 +2.2
715,281 + MPMX20_00695 0.37 +0.7
715,289 - MPMX20_00695 0.38 +0.7
715,289 - MPMX20_00695 0.38 +1.0
715,289 - MPMX20_00695 0.38 +0.7
715,289 - MPMX20_00695 0.38 +1.7
715,289 - MPMX20_00695 0.38 -1.3
715,289 - MPMX20_00695 0.38 +0.4
715,289 - MPMX20_00695 0.38 +1.3
715,289 - MPMX20_00695 0.38 -0.9
715,294 + MPMX20_00695 0.38 +0.6
715,346 + MPMX20_00695 0.42 +1.7
715,353 + MPMX20_00695 0.43 +2.4
715,353 + MPMX20_00695 0.43 +2.2
715,353 - MPMX20_00695 0.43 +0.1
715,354 - MPMX20_00695 0.43 -1.2
715,361 - MPMX20_00695 0.44 +2.2
715,361 - MPMX20_00695 0.44 +3.5
715,371 - MPMX20_00695 0.44 +0.2
715,436 - MPMX20_00695 0.50 +0.6
715,476 + MPMX20_00695 0.53 -0.1
715,524 + MPMX20_00695 0.57 +0.2
715,607 + MPMX20_00695 0.64 +1.3
715,609 + MPMX20_00695 0.64 +1.7
715,626 - MPMX20_00695 0.65 -2.7
715,629 + MPMX20_00695 0.65 +2.7
715,634 + MPMX20_00695 0.66 +1.5
715,637 - MPMX20_00695 0.66 -1.2
715,642 - MPMX20_00695 0.66 -1.8
715,660 + MPMX20_00695 0.68 +1.7
715,692 + MPMX20_00695 0.70 -1.2
715,692 + MPMX20_00695 0.70 -0.9
715,766 + MPMX20_00695 0.76 -0.6
715,774 - MPMX20_00695 0.77 +2.2
715,932 - MPMX20_00695 0.90 +1.3
715,991 + +0.7
715,999 - +0.6
716,009 - +2.7
716,016 + -1.0
716,016 + +2.7
716,016 + +3.0
716,016 + +1.5
716,016 + +0.5
716,016 + +0.3
716,016 + +0.5
716,016 + +1.6
716,016 + +0.9
716,024 - +0.2
716,024 - -0.2
716,024 - -0.8
716,024 - -0.0
716,065 + +0.3
716,065 + -2.5
716,073 - +3.2
716,073 - -0.1
716,073 - -0.9
716,073 - -1.3
716,113 + +0.7
716,113 + -0.2
716,297 + MPMX20_00696 0.18 -0.8
716,313 - MPMX20_00696 0.20 -0.1
716,405 - MPMX20_00696 0.29 -2.7
716,506 + MPMX20_00696 0.39 -0.1
716,559 - MPMX20_00696 0.44 +1.9
716,566 + MPMX20_00696 0.45 +0.8
716,574 - MPMX20_00696 0.46 +0.3
716,593 + MPMX20_00696 0.48 -1.2
716,636 + MPMX20_00696 0.52 +0.2
716,644 - MPMX20_00696 0.53 +0.5
716,773 - MPMX20_00696 0.66 +0.3
716,818 + MPMX20_00696 0.70 +0.1
716,818 - MPMX20_00696 0.70 +1.0
716,881 - MPMX20_00696 0.76 +1.9
716,888 + MPMX20_00696 0.77 +0.8
716,896 - MPMX20_00696 0.78 -2.3
717,015 - MPMX20_00696 0.90 -2.0
717,084 + -0.2
717,102 + -1.4
717,110 - +0.3
717,125 + +2.1
717,133 - +0.8
717,152 - -2.1
717,163 + -0.2
717,163 + +0.4
717,242 + +0.2
717,262 - +2.4
717,265 + +0.6
717,265 + -0.9
717,265 + -2.3
717,265 + -1.2
717,265 + -0.4
717,273 - +1.2
717,273 - +0.6
717,357 + MPMX20_00697 0.15 +0.5
717,365 - MPMX20_00697 0.16 +0.2
717,391 + MPMX20_00697 0.18 +0.1
717,391 + MPMX20_00697 0.18 -0.6
717,494 + MPMX20_00697 0.30 +0.7
717,494 + MPMX20_00697 0.30 -0.1
717,517 - MPMX20_00697 0.32 -0.7
717,566 + MPMX20_00697 0.38 -0.4
717,588 - MPMX20_00697 0.40 +0.8
717,647 - MPMX20_00697 0.47 -1.8
717,661 + MPMX20_00697 0.48 -0.4
717,711 - MPMX20_00697 0.54 +2.4
717,742 - MPMX20_00697 0.57 +1.5
717,742 - MPMX20_00697 0.57 +0.4
717,801 - MPMX20_00697 0.64 -0.0
717,811 + MPMX20_00697 0.65 -0.4
717,811 + MPMX20_00697 0.65 -1.8
717,816 + MPMX20_00697 0.66 +0.9
717,855 - MPMX20_00697 0.70 -0.6
717,855 - MPMX20_00697 0.70 -0.8
717,868 - MPMX20_00697 0.71 +1.4
717,877 + MPMX20_00697 0.72 +0.0
717,977 + MPMX20_00697 0.84 +0.1
717,977 + MPMX20_00697 0.84 +0.5
717,977 + MPMX20_00697 0.84 -0.4
717,985 - MPMX20_00697 0.84 -2.7
718,025 + MPMX20_00697 0.89 +0.5
718,033 - MPMX20_00697 0.90 +1.5
718,090 + -0.3

Or see this region's nucleotide sequence