Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00693

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00691 and MPMX20_00692 are separated by 39 nucleotidesMPMX20_00692 and MPMX20_00693 are separated by 117 nucleotidesMPMX20_00693 and MPMX20_00694 are separated by 11 nucleotides MPMX20_00691: MPMX20_00691 - Lipoate-protein ligase A, at 710,605 to 711,621 _00691 MPMX20_00692: MPMX20_00692 - putative inner membrane protein Smp, at 711,661 to 712,305 _00692 MPMX20_00693: MPMX20_00693 - Phosphoserine phosphatase, at 712,423 to 713,391 _00693 MPMX20_00694: MPMX20_00694 - DNA repair protein RadA, at 713,403 to 714,788 _00694 Position (kb) 712 713 714Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3 4at 711.425 kb on + strand, within MPMX20_00691at 711.427 kb on - strand, within MPMX20_00691at 711.449 kb on + strand, within MPMX20_00691at 711.449 kb on + strand, within MPMX20_00691at 711.450 kb on - strand, within MPMX20_00691at 711.455 kb on - strand, within MPMX20_00691at 711.456 kb on + strand, within MPMX20_00691at 711.457 kb on - strand, within MPMX20_00691at 711.477 kb on - strand, within MPMX20_00691at 711.487 kb on - strand, within MPMX20_00691at 711.508 kb on - strand, within MPMX20_00691at 711.522 kb on + strandat 711.556 kb on + strandat 711.564 kb on - strandat 711.566 kb on - strandat 711.590 kb on + strandat 711.606 kb on + strandat 711.606 kb on + strandat 711.614 kb on - strandat 711.722 kb on + strandat 711.743 kb on + strand, within MPMX20_00692at 711.743 kb on + strand, within MPMX20_00692at 711.743 kb on + strand, within MPMX20_00692at 711.751 kb on - strand, within MPMX20_00692at 711.751 kb on - strand, within MPMX20_00692at 711.779 kb on - strand, within MPMX20_00692at 711.853 kb on - strand, within MPMX20_00692at 711.855 kb on + strand, within MPMX20_00692at 711.855 kb on + strand, within MPMX20_00692at 711.855 kb on + strand, within MPMX20_00692at 711.863 kb on - strand, within MPMX20_00692at 711.884 kb on + strand, within MPMX20_00692at 711.922 kb on - strand, within MPMX20_00692at 711.922 kb on - strand, within MPMX20_00692at 711.922 kb on - strand, within MPMX20_00692at 711.971 kb on - strand, within MPMX20_00692at 712.020 kb on + strand, within MPMX20_00692at 712.083 kb on - strand, within MPMX20_00692at 712.096 kb on - strand, within MPMX20_00692at 712.167 kb on - strand, within MPMX20_00692at 712.197 kb on + strand, within MPMX20_00692at 712.242 kb on + strandat 712.242 kb on + strandat 712.242 kb on + strandat 712.305 kb on + strandat 712.313 kb on - strandat 712.329 kb on + strandat 712.361 kb on - strandat 712.390 kb on - strandat 712.390 kb on - strandat 712.447 kb on - strandat 712.449 kb on + strandat 712.482 kb on - strandat 712.485 kb on + strandat 712.485 kb on + strandat 712.496 kb on + strandat 712.501 kb on - strandat 712.503 kb on + strandat 712.561 kb on - strand, within MPMX20_00693at 712.566 kb on - strand, within MPMX20_00693at 712.636 kb on - strand, within MPMX20_00693at 712.756 kb on - strand, within MPMX20_00693at 712.892 kb on + strand, within MPMX20_00693at 712.892 kb on + strand, within MPMX20_00693at 712.892 kb on + strand, within MPMX20_00693at 712.900 kb on - strand, within MPMX20_00693at 712.900 kb on - strand, within MPMX20_00693at 712.900 kb on - strand, within MPMX20_00693at 712.900 kb on - strand, within MPMX20_00693at 712.988 kb on - strand, within MPMX20_00693at 712.992 kb on + strand, within MPMX20_00693at 712.997 kb on + strand, within MPMX20_00693at 713.039 kb on + strand, within MPMX20_00693at 713.047 kb on - strand, within MPMX20_00693at 713.072 kb on + strand, within MPMX20_00693at 713.111 kb on - strand, within MPMX20_00693at 713.136 kb on + strand, within MPMX20_00693at 713.163 kb on + strand, within MPMX20_00693at 713.163 kb on + strand, within MPMX20_00693at 713.163 kb on + strand, within MPMX20_00693at 713.170 kb on + strand, within MPMX20_00693at 713.171 kb on - strand, within MPMX20_00693at 713.171 kb on - strand, within MPMX20_00693at 713.176 kb on + strand, within MPMX20_00693at 713.184 kb on - strand, within MPMX20_00693at 713.184 kb on - strand, within MPMX20_00693at 713.282 kb on - strand, within MPMX20_00693at 713.297 kb on + strandat 713.298 kb on + strandat 713.343 kb on + strandat 713.349 kb on - strandat 713.354 kb on - strandat 713.363 kb on - strandat 713.365 kb on + strandat 713.365 kb on + strandat 713.412 kb on + strandat 713.469 kb on + strandat 713.470 kb on + strandat 713.472 kb on - strandat 713.508 kb on + strandat 713.511 kb on - strandat 713.614 kb on + strand, within MPMX20_00694at 713.622 kb on - strand, within MPMX20_00694at 713.622 kb on - strand, within MPMX20_00694at 713.624 kb on + strand, within MPMX20_00694at 713.652 kb on - strand, within MPMX20_00694at 713.682 kb on + strand, within MPMX20_00694at 713.682 kb on + strand, within MPMX20_00694at 713.682 kb on + strand, within MPMX20_00694at 713.682 kb on + strand, within MPMX20_00694at 713.690 kb on - strand, within MPMX20_00694at 713.692 kb on + strand, within MPMX20_00694at 713.700 kb on - strand, within MPMX20_00694at 713.707 kb on + strand, within MPMX20_00694at 713.771 kb on + strand, within MPMX20_00694at 713.771 kb on + strand, within MPMX20_00694at 713.771 kb on + strand, within MPMX20_00694at 713.771 kb on + strand, within MPMX20_00694at 713.771 kb on + strand, within MPMX20_00694at 713.779 kb on - strand, within MPMX20_00694at 713.807 kb on - strand, within MPMX20_00694at 713.841 kb on - strand, within MPMX20_00694at 713.841 kb on - strand, within MPMX20_00694at 713.920 kb on + strand, within MPMX20_00694at 713.928 kb on - strand, within MPMX20_00694at 713.946 kb on - strand, within MPMX20_00694at 713.954 kb on - strand, within MPMX20_00694at 713.959 kb on + strand, within MPMX20_00694at 714.091 kb on + strand, within MPMX20_00694at 714.107 kb on - strand, within MPMX20_00694at 714.226 kb on + strand, within MPMX20_00694

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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711,425 + MPMX20_00691 0.81 -1.8
711,427 - MPMX20_00691 0.81 +0.2
711,449 + MPMX20_00691 0.83 +0.7
711,449 + MPMX20_00691 0.83 -1.2
711,450 - MPMX20_00691 0.83 -1.0
711,455 - MPMX20_00691 0.84 +0.5
711,456 + MPMX20_00691 0.84 -0.3
711,457 - MPMX20_00691 0.84 +4.1
711,477 - MPMX20_00691 0.86 +0.2
711,487 - MPMX20_00691 0.87 -0.3
711,508 - MPMX20_00691 0.89 -0.9
711,522 + -0.2
711,556 + +0.3
711,564 - -0.4
711,566 - -1.2
711,590 + +0.8
711,606 + +1.4
711,606 + -1.2
711,614 - -0.0
711,722 + +0.4
711,743 + MPMX20_00692 0.13 -0.3
711,743 + MPMX20_00692 0.13 -1.9
711,743 + MPMX20_00692 0.13 -0.3
711,751 - MPMX20_00692 0.14 +1.7
711,751 - MPMX20_00692 0.14 -0.4
711,779 - MPMX20_00692 0.18 -0.6
711,853 - MPMX20_00692 0.30 +0.4
711,855 + MPMX20_00692 0.30 -1.0
711,855 + MPMX20_00692 0.30 -0.5
711,855 + MPMX20_00692 0.30 -0.3
711,863 - MPMX20_00692 0.31 +0.3
711,884 + MPMX20_00692 0.35 -0.9
711,922 - MPMX20_00692 0.40 -0.6
711,922 - MPMX20_00692 0.40 -2.1
711,922 - MPMX20_00692 0.40 -2.4
711,971 - MPMX20_00692 0.48 -2.1
712,020 + MPMX20_00692 0.56 +1.0
712,083 - MPMX20_00692 0.65 -0.5
712,096 - MPMX20_00692 0.67 -0.3
712,167 - MPMX20_00692 0.78 -0.3
712,197 + MPMX20_00692 0.83 -3.0
712,242 + -3.0
712,242 + +1.1
712,242 + -3.4
712,305 + +0.9
712,313 - +0.4
712,329 + -1.2
712,361 - -0.9
712,390 - -2.5
712,390 - -1.5
712,447 - -0.3
712,449 + -2.3
712,482 - -4.5
712,485 + -3.2
712,485 + -4.5
712,496 + -2.3
712,501 - -0.1
712,503 + -3.5
712,561 - MPMX20_00693 0.14 -2.5
712,566 - MPMX20_00693 0.15 -4.8
712,636 - MPMX20_00693 0.22 -3.2
712,756 - MPMX20_00693 0.34 -2.9
712,892 + MPMX20_00693 0.48 -3.7
712,892 + MPMX20_00693 0.48 -4.4
712,892 + MPMX20_00693 0.48 -4.1
712,900 - MPMX20_00693 0.49 -1.3
712,900 - MPMX20_00693 0.49 -3.6
712,900 - MPMX20_00693 0.49 -3.2
712,900 - MPMX20_00693 0.49 -3.8
712,988 - MPMX20_00693 0.58 -2.4
712,992 + MPMX20_00693 0.59 -3.2
712,997 + MPMX20_00693 0.59 -2.6
713,039 + MPMX20_00693 0.64 -2.2
713,047 - MPMX20_00693 0.64 -2.8
713,072 + MPMX20_00693 0.67 -3.3
713,111 - MPMX20_00693 0.71 -2.6
713,136 + MPMX20_00693 0.74 -3.4
713,163 + MPMX20_00693 0.76 -2.8
713,163 + MPMX20_00693 0.76 -3.7
713,163 + MPMX20_00693 0.76 -3.1
713,170 + MPMX20_00693 0.77 -5.4
713,171 - MPMX20_00693 0.77 -3.3
713,171 - MPMX20_00693 0.77 -4.0
713,176 + MPMX20_00693 0.78 -3.2
713,184 - MPMX20_00693 0.79 -3.2
713,184 - MPMX20_00693 0.79 -2.8
713,282 - MPMX20_00693 0.89 -3.6
713,297 + -3.9
713,298 + -3.6
713,343 + -4.0
713,349 - -1.3
713,354 - -3.8
713,363 - -3.3
713,365 + -3.7
713,365 + -3.0
713,412 + -1.3
713,469 + -0.2
713,470 + -0.1
713,472 - +0.2
713,508 + -0.8
713,511 - -1.0
713,614 + MPMX20_00694 0.15 +0.7
713,622 - MPMX20_00694 0.16 +0.3
713,622 - MPMX20_00694 0.16 -0.0
713,624 + MPMX20_00694 0.16 -3.0
713,652 - MPMX20_00694 0.18 +1.8
713,682 + MPMX20_00694 0.20 -2.1
713,682 + MPMX20_00694 0.20 +0.5
713,682 + MPMX20_00694 0.20 -0.9
713,682 + MPMX20_00694 0.20 +1.7
713,690 - MPMX20_00694 0.21 -0.8
713,692 + MPMX20_00694 0.21 +1.6
713,700 - MPMX20_00694 0.21 +0.8
713,707 + MPMX20_00694 0.22 -1.6
713,771 + MPMX20_00694 0.27 -1.0
713,771 + MPMX20_00694 0.27 -1.1
713,771 + MPMX20_00694 0.27 +0.5
713,771 + MPMX20_00694 0.27 +1.0
713,771 + MPMX20_00694 0.27 +0.1
713,779 - MPMX20_00694 0.27 -1.7
713,807 - MPMX20_00694 0.29 -3.4
713,841 - MPMX20_00694 0.32 +0.2
713,841 - MPMX20_00694 0.32 +1.0
713,920 + MPMX20_00694 0.37 -0.6
713,928 - MPMX20_00694 0.38 +1.1
713,946 - MPMX20_00694 0.39 -1.2
713,954 - MPMX20_00694 0.40 -0.8
713,959 + MPMX20_00694 0.40 -0.9
714,091 + MPMX20_00694 0.50 +0.1
714,107 - MPMX20_00694 0.51 +2.8
714,226 + MPMX20_00694 0.59 -3.0

Or see this region's nucleotide sequence