Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02630

Experiment: oxalate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02628 and MPMX20_02629 are separated by 40 nucleotidesMPMX20_02629 and MPMX20_02630 are separated by 177 nucleotidesMPMX20_02630 and MPMX20_02631 are separated by 269 nucleotides MPMX20_02628: MPMX20_02628 - hypothetical protein, at 2,773,549 to 2,773,788 _02628 MPMX20_02629: MPMX20_02629 - Glutathione-specific gamma-glutamylcyclotransferase, at 2,773,829 to 2,774,524 _02629 MPMX20_02630: MPMX20_02630 - Putative cation transport regulator ChaB, at 2,774,702 to 2,774,932 _02630 MPMX20_02631: MPMX20_02631 - Sodium-potassium/proton antiporter ChaA, at 2,775,202 to 2,776,296 _02631 Position (kb) 2774 2775Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2773.750 kb on - strand, within MPMX20_02628at 2773.805 kb on - strandat 2773.805 kb on - strandat 2773.805 kb on - strandat 2773.851 kb on + strandat 2773.934 kb on + strand, within MPMX20_02629at 2773.939 kb on + strand, within MPMX20_02629at 2773.947 kb on - strand, within MPMX20_02629at 2774.010 kb on + strand, within MPMX20_02629at 2774.018 kb on - strand, within MPMX20_02629at 2774.091 kb on - strand, within MPMX20_02629at 2774.122 kb on + strand, within MPMX20_02629at 2774.122 kb on + strand, within MPMX20_02629at 2774.130 kb on - strand, within MPMX20_02629at 2774.214 kb on - strand, within MPMX20_02629at 2774.227 kb on + strand, within MPMX20_02629at 2774.540 kb on + strandat 2774.542 kb on + strandat 2774.561 kb on + strandat 2774.741 kb on - strand, within MPMX20_02630at 2774.793 kb on - strand, within MPMX20_02630at 2774.830 kb on + strand, within MPMX20_02630at 2774.830 kb on - strand, within MPMX20_02630at 2774.843 kb on + strand, within MPMX20_02630at 2774.851 kb on - strand, within MPMX20_02630at 2774.851 kb on - strand, within MPMX20_02630at 2774.890 kb on - strand, within MPMX20_02630at 2774.900 kb on + strand, within MPMX20_02630at 2774.908 kb on - strand, within MPMX20_02630at 2775.082 kb on - strandat 2775.097 kb on + strandat 2775.206 kb on - strandat 2775.267 kb on + strandat 2775.285 kb on - strandat 2775.303 kb on + strandat 2775.349 kb on + strand, within MPMX20_02631at 2775.357 kb on - strand, within MPMX20_02631at 2775.357 kb on - strand, within MPMX20_02631at 2775.357 kb on - strand, within MPMX20_02631at 2775.362 kb on + strand, within MPMX20_02631at 2775.396 kb on - strand, within MPMX20_02631at 2775.510 kb on - strand, within MPMX20_02631at 2775.541 kb on + strand, within MPMX20_02631at 2775.570 kb on + strand, within MPMX20_02631at 2775.625 kb on - strand, within MPMX20_02631at 2775.625 kb on - strand, within MPMX20_02631at 2775.661 kb on + strand, within MPMX20_02631at 2775.696 kb on + strand, within MPMX20_02631at 2775.696 kb on + strand, within MPMX20_02631at 2775.696 kb on + strand, within MPMX20_02631at 2775.715 kb on - strand, within MPMX20_02631at 2775.739 kb on + strand, within MPMX20_02631at 2775.739 kb on + strand, within MPMX20_02631at 2775.739 kb on + strand, within MPMX20_02631at 2775.741 kb on + strand, within MPMX20_02631at 2775.747 kb on - strand, within MPMX20_02631at 2775.747 kb on - strand, within MPMX20_02631at 2775.831 kb on + strand, within MPMX20_02631at 2775.844 kb on + strand, within MPMX20_02631at 2775.844 kb on + strand, within MPMX20_02631at 2775.852 kb on - strand, within MPMX20_02631

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Per-strain Table

Position Strand Gene LocusTag Fraction oxalate (C)
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2,773,750 - MPMX20_02628 0.84 +0.1
2,773,805 - -4.1
2,773,805 - +1.1
2,773,805 - +0.7
2,773,851 + -0.9
2,773,934 + MPMX20_02629 0.15 -0.2
2,773,939 + MPMX20_02629 0.16 -0.6
2,773,947 - MPMX20_02629 0.17 +0.8
2,774,010 + MPMX20_02629 0.26 +2.3
2,774,018 - MPMX20_02629 0.27 +0.5
2,774,091 - MPMX20_02629 0.38 +0.8
2,774,122 + MPMX20_02629 0.42 +1.1
2,774,122 + MPMX20_02629 0.42 -0.0
2,774,130 - MPMX20_02629 0.43 +1.4
2,774,214 - MPMX20_02629 0.55 +0.7
2,774,227 + MPMX20_02629 0.57 -0.6
2,774,540 + -0.9
2,774,542 + +1.5
2,774,561 + +1.4
2,774,741 - MPMX20_02630 0.17 +0.2
2,774,793 - MPMX20_02630 0.39 +0.8
2,774,830 + MPMX20_02630 0.55 +0.1
2,774,830 - MPMX20_02630 0.55 +1.1
2,774,843 + MPMX20_02630 0.61 +0.7
2,774,851 - MPMX20_02630 0.65 +1.4
2,774,851 - MPMX20_02630 0.65 +0.9
2,774,890 - MPMX20_02630 0.81 -0.2
2,774,900 + MPMX20_02630 0.86 -1.2
2,774,908 - MPMX20_02630 0.89 -0.2
2,775,082 - +0.4
2,775,097 + -0.2
2,775,206 - -2.2
2,775,267 + -1.2
2,775,285 - -0.2
2,775,303 + +0.9
2,775,349 + MPMX20_02631 0.13 +0.5
2,775,357 - MPMX20_02631 0.14 +1.0
2,775,357 - MPMX20_02631 0.14 -0.2
2,775,357 - MPMX20_02631 0.14 -0.2
2,775,362 + MPMX20_02631 0.15 +0.5
2,775,396 - MPMX20_02631 0.18 +0.4
2,775,510 - MPMX20_02631 0.28 +2.3
2,775,541 + MPMX20_02631 0.31 -1.6
2,775,570 + MPMX20_02631 0.34 -2.2
2,775,625 - MPMX20_02631 0.39 +0.8
2,775,625 - MPMX20_02631 0.39 -2.0
2,775,661 + MPMX20_02631 0.42 +0.3
2,775,696 + MPMX20_02631 0.45 +0.9
2,775,696 + MPMX20_02631 0.45 +1.2
2,775,696 + MPMX20_02631 0.45 +1.6
2,775,715 - MPMX20_02631 0.47 +0.8
2,775,739 + MPMX20_02631 0.49 -1.1
2,775,739 + MPMX20_02631 0.49 +0.0
2,775,739 + MPMX20_02631 0.49 -3.3
2,775,741 + MPMX20_02631 0.49 +0.8
2,775,747 - MPMX20_02631 0.50 -3.9
2,775,747 - MPMX20_02631 0.50 +2.1
2,775,831 + MPMX20_02631 0.57 +1.4
2,775,844 + MPMX20_02631 0.59 -2.5
2,775,844 + MPMX20_02631 0.59 +0.6
2,775,852 - MPMX20_02631 0.59 +1.6

Or see this region's nucleotide sequence