Experiment: Sucrose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03308 and MPMX20_03309 are separated by 317 nucleotides MPMX20_03309 and MPMX20_03310 are separated by 44 nucleotides MPMX20_03310 and MPMX20_03311 are separated by 40 nucleotides MPMX20_03311 and MPMX20_03312 are separated by 44 nucleotides
MPMX20_03308: MPMX20_03308 - Cysteine synthase A, at 3,477,164 to 3,478,135
_03308
MPMX20_03309: MPMX20_03309 - Phosphocarrier protein HPr, at 3,478,453 to 3,478,710
_03309
MPMX20_03310: MPMX20_03310 - Phosphoenolpyruvate-protein phosphotransferase, at 3,478,755 to 3,480,482
_03310
MPMX20_03311: MPMX20_03311 - PTS system glucose-specific EIIA component, at 3,480,523 to 3,481,032
_03311
MPMX20_03312: MPMX20_03312 - Pyridoxine/pyridoxal/pyridoxamine kinase, at 3,481,077 to 3,481,913
_03312
Position (kb)
3478
3479
3480
3481 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3477.760 kb on - strand, within MPMX20_03308 at 3477.781 kb on - strand, within MPMX20_03308 at 3477.796 kb on - strand, within MPMX20_03308 at 3477.820 kb on + strand, within MPMX20_03308 at 3477.828 kb on - strand, within MPMX20_03308 at 3477.876 kb on + strand, within MPMX20_03308 at 3477.902 kb on + strand, within MPMX20_03308 at 3477.947 kb on - strand, within MPMX20_03308 at 3478.077 kb on - strand at 3478.089 kb on + strand at 3478.130 kb on + strand at 3478.221 kb on + strand at 3478.404 kb on + strand at 3478.412 kb on - strand at 3478.489 kb on + strand, within MPMX20_03309 at 3478.490 kb on + strand, within MPMX20_03309 at 3478.607 kb on + strand, within MPMX20_03309 at 3478.615 kb on - strand, within MPMX20_03309 at 3478.615 kb on - strand, within MPMX20_03309 at 3478.623 kb on + strand, within MPMX20_03309 at 3478.651 kb on + strand, within MPMX20_03309 at 3478.675 kb on - strand, within MPMX20_03309 at 3478.744 kb on + strand at 3478.928 kb on + strand, within MPMX20_03310 at 3478.969 kb on + strand, within MPMX20_03310 at 3479.045 kb on - strand, within MPMX20_03310 at 3479.191 kb on + strand, within MPMX20_03310 at 3479.203 kb on + strand, within MPMX20_03310 at 3479.228 kb on + strand, within MPMX20_03310 at 3479.246 kb on - strand, within MPMX20_03310 at 3479.331 kb on - strand, within MPMX20_03310 at 3479.341 kb on + strand, within MPMX20_03310 at 3479.476 kb on + strand, within MPMX20_03310 at 3479.558 kb on + strand, within MPMX20_03310 at 3479.632 kb on - strand, within MPMX20_03310 at 3479.729 kb on - strand, within MPMX20_03310 at 3479.747 kb on - strand, within MPMX20_03310 at 3479.858 kb on + strand, within MPMX20_03310 at 3479.968 kb on - strand, within MPMX20_03310 at 3480.005 kb on - strand, within MPMX20_03310 at 3480.057 kb on - strand, within MPMX20_03310 at 3480.126 kb on + strand, within MPMX20_03310 at 3480.133 kb on + strand, within MPMX20_03310 at 3480.133 kb on + strand, within MPMX20_03310 at 3480.392 kb on + strand at 3480.392 kb on + strand at 3480.392 kb on + strand at 3481.088 kb on + strand at 3481.088 kb on + strand at 3481.096 kb on - strand at 3481.096 kb on - strand at 3481.113 kb on - strand at 3481.202 kb on + strand, within MPMX20_03312 at 3481.202 kb on + strand, within MPMX20_03312 at 3481.215 kb on - strand, within MPMX20_03312 at 3481.256 kb on + strand, within MPMX20_03312 at 3481.263 kb on + strand, within MPMX20_03312 at 3481.265 kb on + strand, within MPMX20_03312 at 3481.332 kb on + strand, within MPMX20_03312 at 3481.332 kb on + strand, within MPMX20_03312 at 3481.332 kb on + strand, within MPMX20_03312 at 3481.376 kb on - strand, within MPMX20_03312 at 3481.417 kb on - strand, within MPMX20_03312 at 3481.447 kb on - strand, within MPMX20_03312
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose (C) remove 3,477,760 - MPMX20_03308 0.61 -0.4 3,477,781 - MPMX20_03308 0.63 -0.0 3,477,796 - MPMX20_03308 0.65 -1.7 3,477,820 + MPMX20_03308 0.67 -0.0 3,477,828 - MPMX20_03308 0.68 -1.8 3,477,876 + MPMX20_03308 0.73 -0.3 3,477,902 + MPMX20_03308 0.76 -1.7 3,477,947 - MPMX20_03308 0.81 -1.4 3,478,077 - -3.6 3,478,089 + +0.1 3,478,130 + -1.0 3,478,221 + -2.5 3,478,404 + -0.9 3,478,412 - -2.0 3,478,489 + MPMX20_03309 0.14 -0.0 3,478,490 + MPMX20_03309 0.14 -1.8 3,478,607 + MPMX20_03309 0.60 -2.9 3,478,615 - MPMX20_03309 0.63 -2.9 3,478,615 - MPMX20_03309 0.63 -1.3 3,478,623 + MPMX20_03309 0.66 -1.3 3,478,651 + MPMX20_03309 0.77 -1.6 3,478,675 - MPMX20_03309 0.86 -1.2 3,478,744 + -1.0 3,478,928 + MPMX20_03310 0.10 -1.0 3,478,969 + MPMX20_03310 0.12 -1.6 3,479,045 - MPMX20_03310 0.17 -2.7 3,479,191 + MPMX20_03310 0.25 -1.3 3,479,203 + MPMX20_03310 0.26 -2.0 3,479,228 + MPMX20_03310 0.27 -0.8 3,479,246 - MPMX20_03310 0.28 -1.6 3,479,331 - MPMX20_03310 0.33 -2.2 3,479,341 + MPMX20_03310 0.34 -0.0 3,479,476 + MPMX20_03310 0.42 -1.5 3,479,558 + MPMX20_03310 0.46 -1.5 3,479,632 - MPMX20_03310 0.51 -3.0 3,479,729 - MPMX20_03310 0.56 -2.8 3,479,747 - MPMX20_03310 0.57 -1.6 3,479,858 + MPMX20_03310 0.64 -1.8 3,479,968 - MPMX20_03310 0.70 -2.2 3,480,005 - MPMX20_03310 0.72 -1.3 3,480,057 - MPMX20_03310 0.75 -2.2 3,480,126 + MPMX20_03310 0.79 -2.4 3,480,133 + MPMX20_03310 0.80 -2.9 3,480,133 + MPMX20_03310 0.80 -2.5 3,480,392 + -1.8 3,480,392 + -2.0 3,480,392 + -2.3 3,481,088 + -1.5 3,481,088 + +0.5 3,481,096 - -0.0 3,481,096 - +0.1 3,481,113 - -0.6 3,481,202 + MPMX20_03312 0.15 +0.1 3,481,202 + MPMX20_03312 0.15 +0.5 3,481,215 - MPMX20_03312 0.16 +1.2 3,481,256 + MPMX20_03312 0.21 +0.2 3,481,263 + MPMX20_03312 0.22 +1.5 3,481,265 + MPMX20_03312 0.22 -0.1 3,481,332 + MPMX20_03312 0.30 -0.3 3,481,332 + MPMX20_03312 0.30 -0.5 3,481,332 + MPMX20_03312 0.30 +1.7 3,481,376 - MPMX20_03312 0.36 -0.6 3,481,417 - MPMX20_03312 0.41 +0.4 3,481,447 - MPMX20_03312 0.44 +0.1
Or see this region's nucleotide sequence