Experiment: Lauric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS15445 and ABZR87_RS15450 are separated by 146 nucleotides ABZR87_RS15450 and ABZR87_RS15455 are separated by 12 nucleotides
ABZR87_RS15445: ABZR87_RS15445 - MFS transporter, at 3,249,839 to 3,251,230
_RS15445
ABZR87_RS15450: ABZR87_RS15450 - 2-dehydropantoate 2-reductase, at 3,251,377 to 3,252,318
_RS15450
ABZR87_RS15455: ABZR87_RS15455 - aldehyde dehydrogenase, at 3,252,331 to 3,253,815
_RS15455
Position (kb)
3251
3252
3253 Strain fitness (log2 ratio)
-1
0
1 at 3250.407 kb on + strand, within ABZR87_RS15445 at 3250.408 kb on - strand, within ABZR87_RS15445 at 3250.408 kb on - strand, within ABZR87_RS15445 at 3250.704 kb on + strand, within ABZR87_RS15445 at 3250.705 kb on - strand, within ABZR87_RS15445 at 3251.410 kb on + strand at 3251.411 kb on - strand at 3251.425 kb on + strand at 3251.425 kb on + strand at 3251.619 kb on + strand, within ABZR87_RS15450 at 3251.620 kb on - strand, within ABZR87_RS15450 at 3251.690 kb on - strand, within ABZR87_RS15450 at 3252.469 kb on + strand at 3252.469 kb on + strand at 3252.470 kb on - strand at 3252.470 kb on - strand at 3252.470 kb on - strand at 3252.535 kb on + strand, within ABZR87_RS15455 at 3252.656 kb on + strand, within ABZR87_RS15455 at 3252.656 kb on + strand, within ABZR87_RS15455 at 3253.003 kb on + strand, within ABZR87_RS15455 at 3253.003 kb on + strand, within ABZR87_RS15455 at 3253.003 kb on + strand, within ABZR87_RS15455 at 3253.052 kb on + strand, within ABZR87_RS15455 at 3253.053 kb on - strand, within ABZR87_RS15455 at 3253.102 kb on - strand, within ABZR87_RS15455 at 3253.102 kb on - strand, within ABZR87_RS15455 at 3253.281 kb on + strand, within ABZR87_RS15455
Per-strain Table
Position Strand Gene LocusTag Fraction Lauric (C) remove 3,250,407 + ABZR87_RS15445 0.41 +0.1 3,250,408 - ABZR87_RS15445 0.41 +0.5 3,250,408 - ABZR87_RS15445 0.41 +0.3 3,250,704 + ABZR87_RS15445 0.62 -1.4 3,250,705 - ABZR87_RS15445 0.62 +1.0 3,251,410 + -0.1 3,251,411 - -0.6 3,251,425 + -0.5 3,251,425 + +0.1 3,251,619 + ABZR87_RS15450 0.26 -1.4 3,251,620 - ABZR87_RS15450 0.26 -0.2 3,251,690 - ABZR87_RS15450 0.33 -0.2 3,252,469 + -0.3 3,252,469 + +0.6 3,252,470 - -0.5 3,252,470 - -0.9 3,252,470 - -0.2 3,252,535 + ABZR87_RS15455 0.14 +0.9 3,252,656 + ABZR87_RS15455 0.22 +0.6 3,252,656 + ABZR87_RS15455 0.22 +1.0 3,253,003 + ABZR87_RS15455 0.45 +0.0 3,253,003 + ABZR87_RS15455 0.45 +0.3 3,253,003 + ABZR87_RS15455 0.45 -0.3 3,253,052 + ABZR87_RS15455 0.49 -1.3 3,253,053 - ABZR87_RS15455 0.49 -0.2 3,253,102 - ABZR87_RS15455 0.52 -0.0 3,253,102 - ABZR87_RS15455 0.52 +1.3 3,253,281 + ABZR87_RS15455 0.64 +0.6
Or see this region's nucleotide sequence