Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS17350 and ABZR87_RS17355 are separated by 168 nucleotides ABZR87_RS17355 and ABZR87_RS17360 are separated by 63 nucleotides ABZR87_RS17360 and ABZR87_RS17365 are separated by 205 nucleotides
ABZR87_RS17350: ABZR87_RS17350 - OXA-60 family carbapenem-hydrolyzing class D beta-lactamase, at 247,474 to 248,289
_RS17350
ABZR87_RS17355: ABZR87_RS17355 - hypothetical protein, at 248,458 to 248,901
_RS17355
ABZR87_RS17360: ABZR87_RS17360 - glucan biosynthesis protein, at 248,965 to 250,578
_RS17360
ABZR87_RS17365: ABZR87_RS17365 - serine hydrolase, at 250,784 to 251,926
_RS17365
Position (kb) 248
249
250
251 Strain fitness (log2 ratio) -2
-1
0
1
2 at 248.183 kb on - strand, within ABZR87_RS17350 at 248.303 kb on - strand at 248.303 kb on - strand at 248.303 kb on - strand at 248.303 kb on - strand at 248.303 kb on - strand at 248.303 kb on - strand at 248.312 kb on + strand at 248.313 kb on - strand at 248.328 kb on - strand at 248.457 kb on + strand at 248.457 kb on + strand at 248.457 kb on + strand at 248.457 kb on + strand at 248.457 kb on + strand at 248.457 kb on + strand at 248.457 kb on + strand at 248.457 kb on + strand at 248.457 kb on + strand at 248.457 kb on + strand at 248.458 kb on - strand at 248.458 kb on - strand at 248.458 kb on - strand at 248.458 kb on - strand at 248.470 kb on + strand at 248.470 kb on + strand at 248.471 kb on - strand at 248.471 kb on - strand at 248.471 kb on - strand at 248.551 kb on + strand, within ABZR87_RS17355 at 248.552 kb on - strand, within ABZR87_RS17355 at 248.552 kb on - strand, within ABZR87_RS17355 at 248.552 kb on - strand, within ABZR87_RS17355 at 248.791 kb on + strand, within ABZR87_RS17355 at 248.893 kb on + strand at 248.894 kb on - strand at 248.900 kb on - strand at 249.005 kb on + strand at 249.005 kb on + strand at 249.006 kb on - strand at 249.006 kb on - strand at 249.006 kb on - strand at 249.006 kb on - strand at 249.011 kb on + strand at 249.011 kb on + strand at 249.011 kb on + strand at 249.012 kb on - strand at 249.152 kb on + strand, within ABZR87_RS17360 at 249.152 kb on + strand, within ABZR87_RS17360 at 249.152 kb on + strand, within ABZR87_RS17360 at 249.153 kb on - strand, within ABZR87_RS17360 at 249.153 kb on - strand, within ABZR87_RS17360 at 249.153 kb on - strand, within ABZR87_RS17360 at 249.153 kb on - strand, within ABZR87_RS17360 at 249.153 kb on - strand, within ABZR87_RS17360 at 249.153 kb on - strand, within ABZR87_RS17360 at 249.542 kb on + strand, within ABZR87_RS17360 at 249.543 kb on - strand, within ABZR87_RS17360 at 249.746 kb on + strand, within ABZR87_RS17360 at 249.746 kb on + strand, within ABZR87_RS17360 at 249.747 kb on - strand, within ABZR87_RS17360 at 249.854 kb on + strand, within ABZR87_RS17360 at 249.888 kb on + strand, within ABZR87_RS17360 at 249.888 kb on + strand, within ABZR87_RS17360 at 249.889 kb on - strand, within ABZR87_RS17360 at 249.890 kb on + strand, within ABZR87_RS17360 at 249.890 kb on + strand, within ABZR87_RS17360 at 249.891 kb on - strand, within ABZR87_RS17360 at 249.891 kb on - strand, within ABZR87_RS17360 at 249.891 kb on - strand, within ABZR87_RS17360 at 249.891 kb on - strand, within ABZR87_RS17360 at 249.891 kb on - strand, within ABZR87_RS17360 at 249.892 kb on + strand, within ABZR87_RS17360 at 250.022 kb on + strand, within ABZR87_RS17360 at 250.022 kb on + strand, within ABZR87_RS17360 at 250.022 kb on + strand, within ABZR87_RS17360 at 250.022 kb on + strand, within ABZR87_RS17360 at 250.023 kb on - strand, within ABZR87_RS17360 at 250.023 kb on - strand, within ABZR87_RS17360 at 250.047 kb on - strand, within ABZR87_RS17360 at 250.361 kb on + strand, within ABZR87_RS17360 at 250.361 kb on + strand, within ABZR87_RS17360 at 250.361 kb on + strand, within ABZR87_RS17360 at 250.362 kb on - strand, within ABZR87_RS17360 at 250.410 kb on - strand, within ABZR87_RS17360 at 250.578 kb on + strand at 250.578 kb on + strand at 250.578 kb on + strand at 250.578 kb on + strand at 250.578 kb on + strand at 250.578 kb on + strand at 250.578 kb on + strand at 250.578 kb on + strand at 250.579 kb on - strand at 250.579 kb on - strand at 250.579 kb on - strand at 250.579 kb on - strand at 250.579 kb on - strand at 250.579 kb on - strand at 250.579 kb on - strand at 250.579 kb on - strand at 250.579 kb on - strand at 250.594 kb on - strand at 250.594 kb on - strand at 250.604 kb on + strand at 250.604 kb on + strand at 250.605 kb on - strand at 250.753 kb on + strand at 251.028 kb on - strand, within ABZR87_RS17365 at 251.028 kb on - strand, within ABZR87_RS17365 at 251.028 kb on - strand, within ABZR87_RS17365 at 251.028 kb on - strand, within ABZR87_RS17365 at 251.028 kb on - strand, within ABZR87_RS17365 at 251.028 kb on - strand, within ABZR87_RS17365 at 251.360 kb on + strand, within ABZR87_RS17365 at 251.360 kb on + strand, within ABZR87_RS17365 at 251.360 kb on + strand, within ABZR87_RS17365 at 251.360 kb on + strand, within ABZR87_RS17365 at 251.360 kb on + strand, within ABZR87_RS17365 at 251.361 kb on - strand, within ABZR87_RS17365 at 251.361 kb on - strand, within ABZR87_RS17365 at 251.361 kb on - strand, within ABZR87_RS17365 at 251.408 kb on + strand, within ABZR87_RS17365 at 251.409 kb on - strand, within ABZR87_RS17365 at 251.409 kb on - strand, within ABZR87_RS17365 at 251.409 kb on - strand, within ABZR87_RS17365 at 251.409 kb on - strand, within ABZR87_RS17365 at 251.477 kb on + strand, within ABZR87_RS17365 at 251.477 kb on + strand, within ABZR87_RS17365 at 251.478 kb on - strand, within ABZR87_RS17365
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 248,183 - ABZR87_RS17350 0.87 -0.4 248,303 - +0.1 248,303 - -0.8 248,303 - +0.6 248,303 - +0.2 248,303 - +0.5 248,303 - -0.1 248,312 + -1.2 248,313 - -0.6 248,328 - +0.4 248,457 + -1.6 248,457 + +0.0 248,457 + +0.1 248,457 + +0.8 248,457 + -0.2 248,457 + +2.6 248,457 + +2.2 248,457 + +1.0 248,457 + -0.2 248,457 + +1.0 248,458 - -0.5 248,458 - +0.7 248,458 - -1.6 248,458 - -0.0 248,470 + -1.6 248,470 + -0.6 248,471 - -0.5 248,471 - -0.1 248,471 - -2.0 248,551 + ABZR87_RS17355 0.21 -0.2 248,552 - ABZR87_RS17355 0.21 +0.2 248,552 - ABZR87_RS17355 0.21 -0.8 248,552 - ABZR87_RS17355 0.21 -0.7 248,791 + ABZR87_RS17355 0.75 +0.5 248,893 + +0.9 248,894 - -2.1 248,900 - -0.6 249,005 + -0.0 249,005 + +1.7 249,006 - -0.1 249,006 - +2.4 249,006 - +0.9 249,006 - +1.0 249,011 + +0.5 249,011 + +0.5 249,011 + +2.4 249,012 - +0.5 249,152 + ABZR87_RS17360 0.12 +0.6 249,152 + ABZR87_RS17360 0.12 +0.9 249,152 + ABZR87_RS17360 0.12 +0.4 249,153 - ABZR87_RS17360 0.12 +0.1 249,153 - ABZR87_RS17360 0.12 +1.8 249,153 - ABZR87_RS17360 0.12 +1.1 249,153 - ABZR87_RS17360 0.12 +2.3 249,153 - ABZR87_RS17360 0.12 -1.0 249,153 - ABZR87_RS17360 0.12 +1.3 249,542 + ABZR87_RS17360 0.36 -0.3 249,543 - ABZR87_RS17360 0.36 -1.0 249,746 + ABZR87_RS17360 0.48 +0.4 249,746 + ABZR87_RS17360 0.48 -0.0 249,747 - ABZR87_RS17360 0.48 +1.4 249,854 + ABZR87_RS17360 0.55 +0.9 249,888 + ABZR87_RS17360 0.57 +0.4 249,888 + ABZR87_RS17360 0.57 +1.5 249,889 - ABZR87_RS17360 0.57 +0.9 249,890 + ABZR87_RS17360 0.57 -2.1 249,890 + ABZR87_RS17360 0.57 +0.7 249,891 - ABZR87_RS17360 0.57 +0.0 249,891 - ABZR87_RS17360 0.57 +0.4 249,891 - ABZR87_RS17360 0.57 +0.4 249,891 - ABZR87_RS17360 0.57 +1.2 249,891 - ABZR87_RS17360 0.57 +1.7 249,892 + ABZR87_RS17360 0.57 +1.1 250,022 + ABZR87_RS17360 0.65 -0.6 250,022 + ABZR87_RS17360 0.65 +1.9 250,022 + ABZR87_RS17360 0.65 +1.3 250,022 + ABZR87_RS17360 0.65 +0.9 250,023 - ABZR87_RS17360 0.66 +2.2 250,023 - ABZR87_RS17360 0.66 +0.4 250,047 - ABZR87_RS17360 0.67 +0.1 250,361 + ABZR87_RS17360 0.86 +0.5 250,361 + ABZR87_RS17360 0.86 -0.1 250,361 + ABZR87_RS17360 0.86 +0.4 250,362 - ABZR87_RS17360 0.87 -1.2 250,410 - ABZR87_RS17360 0.90 +1.6 250,578 + +0.4 250,578 + -1.1 250,578 + +0.5 250,578 + +1.7 250,578 + -0.7 250,578 + +2.1 250,578 + +0.2 250,578 + +0.2 250,579 - +0.3 250,579 - -1.5 250,579 - +1.0 250,579 - -1.6 250,579 - +1.2 250,579 - -0.4 250,579 - +0.4 250,579 - +0.5 250,579 - +0.0 250,594 - +0.6 250,594 - +0.7 250,604 + +0.5 250,604 + +0.8 250,605 - -1.8 250,753 + -1.5 251,028 - ABZR87_RS17365 0.21 -0.4 251,028 - ABZR87_RS17365 0.21 +1.6 251,028 - ABZR87_RS17365 0.21 +0.2 251,028 - ABZR87_RS17365 0.21 -0.5 251,028 - ABZR87_RS17365 0.21 -1.8 251,028 - ABZR87_RS17365 0.21 -0.2 251,360 + ABZR87_RS17365 0.50 +1.3 251,360 + ABZR87_RS17365 0.50 -1.2 251,360 + ABZR87_RS17365 0.50 +0.2 251,360 + ABZR87_RS17365 0.50 +1.4 251,360 + ABZR87_RS17365 0.50 +0.6 251,361 - ABZR87_RS17365 0.50 -0.2 251,361 - ABZR87_RS17365 0.50 +0.7 251,361 - ABZR87_RS17365 0.50 +0.2 251,408 + ABZR87_RS17365 0.55 +0.7 251,409 - ABZR87_RS17365 0.55 +0.1 251,409 - ABZR87_RS17365 0.55 +0.9 251,409 - ABZR87_RS17365 0.55 -0.9 251,409 - ABZR87_RS17365 0.55 -0.8 251,477 + ABZR87_RS17365 0.61 -0.6 251,477 + ABZR87_RS17365 0.61 +1.1 251,478 - ABZR87_RS17365 0.61 +0.2
Or see this region's nucleotide sequence