Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS02185 and ABZR87_RS02190 are separated by 78 nucleotides ABZR87_RS02190 and ABZR87_RS02195 are separated by 46 nucleotides
ABZR87_RS02185: ABZR87_RS02185 - MDR family oxidoreductase, at 469,568 to 470,584
_RS02185
ABZR87_RS02190: ABZR87_RS02190 - DsbC family protein, at 470,663 to 471,409
_RS02190
ABZR87_RS02195: ABZR87_RS02195 - UbiH/UbiF family hydroxylase, at 471,456 to 472,751
_RS02195
Position (kb) 470
471
472 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 469.849 kb on - strand, within ABZR87_RS02185 at 470.163 kb on + strand, within ABZR87_RS02185 at 470.164 kb on - strand, within ABZR87_RS02185 at 470.164 kb on - strand, within ABZR87_RS02185 at 470.387 kb on + strand, within ABZR87_RS02185 at 470.387 kb on + strand, within ABZR87_RS02185 at 470.388 kb on - strand, within ABZR87_RS02185 at 470.427 kb on + strand, within ABZR87_RS02185 at 470.428 kb on - strand, within ABZR87_RS02185 at 470.428 kb on - strand, within ABZR87_RS02185 at 470.428 kb on - strand, within ABZR87_RS02185 at 470.428 kb on - strand, within ABZR87_RS02185 at 470.428 kb on - strand, within ABZR87_RS02185 at 470.428 kb on - strand, within ABZR87_RS02185 at 470.428 kb on - strand, within ABZR87_RS02185 at 470.665 kb on - strand at 470.665 kb on - strand at 470.665 kb on - strand at 470.665 kb on - strand at 470.810 kb on - strand, within ABZR87_RS02190 at 470.810 kb on - strand, within ABZR87_RS02190 at 470.946 kb on + strand, within ABZR87_RS02190 at 470.947 kb on - strand, within ABZR87_RS02190 at 470.947 kb on - strand, within ABZR87_RS02190 at 470.947 kb on - strand, within ABZR87_RS02190 at 470.997 kb on + strand, within ABZR87_RS02190 at 470.998 kb on - strand, within ABZR87_RS02190 at 471.171 kb on + strand, within ABZR87_RS02190 at 471.171 kb on + strand, within ABZR87_RS02190 at 471.193 kb on - strand, within ABZR87_RS02190 at 471.193 kb on - strand, within ABZR87_RS02190 at 471.222 kb on + strand, within ABZR87_RS02190 at 471.222 kb on + strand, within ABZR87_RS02190 at 471.223 kb on - strand, within ABZR87_RS02190 at 471.223 kb on - strand, within ABZR87_RS02190 at 471.338 kb on + strand at 471.338 kb on + strand at 471.338 kb on + strand at 471.338 kb on + strand at 471.338 kb on + strand at 471.338 kb on + strand at 471.338 kb on + strand at 471.338 kb on + strand at 471.338 kb on + strand at 471.338 kb on + strand at 471.338 kb on + strand at 471.338 kb on + strand at 471.339 kb on - strand at 471.339 kb on - strand at 471.339 kb on - strand at 471.339 kb on - strand at 471.339 kb on - strand at 471.342 kb on + strand at 471.342 kb on + strand at 471.342 kb on + strand at 471.342 kb on + strand at 471.343 kb on - strand at 471.343 kb on - strand at 471.343 kb on - strand at 471.343 kb on - strand at 471.343 kb on - strand at 471.343 kb on - strand at 471.343 kb on - strand at 471.397 kb on + strand at 471.409 kb on + strand at 471.409 kb on + strand at 471.409 kb on + strand at 471.409 kb on + strand at 471.409 kb on + strand at 471.409 kb on + strand at 471.409 kb on + strand at 471.409 kb on + strand at 471.409 kb on + strand at 471.410 kb on - strand at 471.410 kb on - strand at 471.410 kb on - strand at 471.492 kb on - strand at 471.492 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 469,849 - ABZR87_RS02185 0.28 -2.8 470,163 + ABZR87_RS02185 0.59 -0.6 470,164 - ABZR87_RS02185 0.59 +0.7 470,164 - ABZR87_RS02185 0.59 -1.1 470,387 + ABZR87_RS02185 0.81 +1.1 470,387 + ABZR87_RS02185 0.81 +0.1 470,388 - ABZR87_RS02185 0.81 +0.5 470,427 + ABZR87_RS02185 0.84 +0.6 470,428 - ABZR87_RS02185 0.85 -1.0 470,428 - ABZR87_RS02185 0.85 -1.3 470,428 - ABZR87_RS02185 0.85 +0.6 470,428 - ABZR87_RS02185 0.85 -0.3 470,428 - ABZR87_RS02185 0.85 +0.9 470,428 - ABZR87_RS02185 0.85 +0.0 470,428 - ABZR87_RS02185 0.85 -0.2 470,665 - -0.1 470,665 - +0.7 470,665 - +1.2 470,665 - -0.1 470,810 - ABZR87_RS02190 0.20 +1.1 470,810 - ABZR87_RS02190 0.20 +1.9 470,946 + ABZR87_RS02190 0.38 +1.2 470,947 - ABZR87_RS02190 0.38 +1.1 470,947 - ABZR87_RS02190 0.38 +0.8 470,947 - ABZR87_RS02190 0.38 +2.4 470,997 + ABZR87_RS02190 0.45 +1.0 470,998 - ABZR87_RS02190 0.45 -0.3 471,171 + ABZR87_RS02190 0.68 +1.6 471,171 + ABZR87_RS02190 0.68 +2.7 471,193 - ABZR87_RS02190 0.71 -0.6 471,193 - ABZR87_RS02190 0.71 +2.9 471,222 + ABZR87_RS02190 0.75 +1.7 471,222 + ABZR87_RS02190 0.75 +1.6 471,223 - ABZR87_RS02190 0.75 -0.3 471,223 - ABZR87_RS02190 0.75 +2.3 471,338 + +0.6 471,338 + +0.9 471,338 + -1.3 471,338 + -0.1 471,338 + +0.3 471,338 + +0.2 471,338 + +1.0 471,338 + -1.8 471,338 + +0.7 471,338 + +2.2 471,338 + +1.5 471,338 + +1.4 471,339 - -0.2 471,339 - +3.2 471,339 - +0.6 471,339 - -0.5 471,339 - +1.4 471,342 + +1.3 471,342 + +1.0 471,342 + +2.5 471,342 + +1.1 471,343 - +0.2 471,343 - +0.8 471,343 - +1.7 471,343 - +0.6 471,343 - -0.4 471,343 - -0.8 471,343 - +0.9 471,397 + +0.5 471,409 + +0.7 471,409 + +1.4 471,409 + +0.8 471,409 + +1.4 471,409 + -0.2 471,409 + +0.8 471,409 + +1.1 471,409 + +2.3 471,409 + +1.2 471,410 - -0.1 471,410 - -0.5 471,410 - +0.0 471,492 - +1.5 471,492 - +1.0
Or see this region's nucleotide sequence