Experiment: KB with dihydrojasmonic, methyl ester 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3102 and Psyr_3103 are separated by 0 nucleotides Psyr_3103 and Psyr_3104 overlap by 1 nucleotides Psyr_3104 and Psyr_3105 overlap by 4 nucleotides
Psyr_3102: Psyr_3102 - transcriptional regulator, LysR family, at 3,719,982 to 3,720,911
_3102
Psyr_3103: Psyr_3103 - phosphate ABC transporter ATP-binding protein, PhoT family, at 3,720,912 to 3,721,691
_3103
Psyr_3104: Psyr_3104 - phosphate ABC transporter membrane protein 2, PhoT family, at 3,721,691 to 3,722,575
_3104
Psyr_3105: Psyr_3105 - phosphate ABC transporter membrane protein 1, PhoT family, at 3,722,572 to 3,723,567
_3105
Position (kb) 3720
3721
3722 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 3719.922 kb on - strand at 3719.938 kb on + strand at 3720.168 kb on - strand, within Psyr_3102 at 3720.168 kb on - strand, within Psyr_3102 at 3720.402 kb on - strand, within Psyr_3102 at 3720.402 kb on - strand, within Psyr_3102 at 3720.402 kb on - strand, within Psyr_3102 at 3720.402 kb on - strand, within Psyr_3102 at 3720.496 kb on + strand, within Psyr_3102 at 3720.759 kb on + strand, within Psyr_3102 at 3720.760 kb on - strand, within Psyr_3102 at 3720.760 kb on - strand, within Psyr_3102 at 3720.760 kb on - strand, within Psyr_3102 at 3720.760 kb on - strand, within Psyr_3102 at 3720.760 kb on - strand, within Psyr_3102 at 3720.934 kb on + strand at 3720.934 kb on + strand at 3720.934 kb on + strand at 3720.935 kb on - strand at 3720.935 kb on - strand at 3720.935 kb on - strand at 3721.024 kb on + strand, within Psyr_3103 at 3721.024 kb on + strand, within Psyr_3103 at 3721.025 kb on - strand, within Psyr_3103 at 3721.090 kb on - strand, within Psyr_3103 at 3721.090 kb on - strand, within Psyr_3103 at 3721.363 kb on + strand, within Psyr_3103 at 3721.435 kb on + strand, within Psyr_3103 at 3721.498 kb on + strand, within Psyr_3103 at 3721.508 kb on - strand, within Psyr_3103 at 3721.508 kb on - strand, within Psyr_3103 at 3721.718 kb on + strand at 3721.745 kb on + strand at 3721.746 kb on - strand at 3721.941 kb on - strand, within Psyr_3104 at 3722.181 kb on + strand, within Psyr_3104 at 3722.181 kb on + strand, within Psyr_3104 at 3722.263 kb on - strand, within Psyr_3104 at 3722.504 kb on + strand at 3722.569 kb on + strand at 3722.576 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with dihydrojasmonic, methyl ester 10 mM remove 3,719,922 - +0.4 3,719,938 + +2.5 3,720,168 - Psyr_3102 0.20 +0.5 3,720,168 - Psyr_3102 0.20 +0.2 3,720,402 - Psyr_3102 0.45 +0.1 3,720,402 - Psyr_3102 0.45 +0.4 3,720,402 - Psyr_3102 0.45 -1.7 3,720,402 - Psyr_3102 0.45 +3.8 3,720,496 + Psyr_3102 0.55 -1.4 3,720,759 + Psyr_3102 0.84 +0.4 3,720,760 - Psyr_3102 0.84 +3.1 3,720,760 - Psyr_3102 0.84 +0.2 3,720,760 - Psyr_3102 0.84 -1.7 3,720,760 - Psyr_3102 0.84 +0.3 3,720,760 - Psyr_3102 0.84 -1.5 3,720,934 + -0.1 3,720,934 + -0.9 3,720,934 + -1.2 3,720,935 - -0.6 3,720,935 - +1.0 3,720,935 - +0.7 3,721,024 + Psyr_3103 0.14 +0.0 3,721,024 + Psyr_3103 0.14 -0.1 3,721,025 - Psyr_3103 0.14 -0.2 3,721,090 - Psyr_3103 0.23 +0.5 3,721,090 - Psyr_3103 0.23 -2.1 3,721,363 + Psyr_3103 0.58 -1.7 3,721,435 + Psyr_3103 0.67 -0.9 3,721,498 + Psyr_3103 0.75 -0.9 3,721,508 - Psyr_3103 0.76 -0.8 3,721,508 - Psyr_3103 0.76 -0.8 3,721,718 + +1.8 3,721,745 + -0.4 3,721,746 - -0.6 3,721,941 - Psyr_3104 0.28 +0.6 3,722,181 + Psyr_3104 0.55 +0.3 3,722,181 + Psyr_3104 0.55 -0.3 3,722,263 - Psyr_3104 0.65 +1.8 3,722,504 + -0.5 3,722,569 + +0.4 3,722,576 - -0.2
Or see this region's nucleotide sequence