Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2076

Experiment: Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%
2,158,767	+	parA	DVU2075	0.32	+0.0
2,158,847	-	parA	DVU2075	0.42	-0.3
2,159,074	-	parA	DVU2075	0.71	-0.8
2,159,221	+				-0.3
2,159,228	+				+1.3
2,159,292	-				+0.6
2,159,292	-				-0.4
2,159,292	-				-1.3
2,159,345	+				-0.5
2,159,345	+				-0.2
2,159,345	+				-1.8
2,159,345	+				+0.4
2,159,353	-				+0.4
2,159,358	-				-0.6
2,159,555	+	cheR-2	DVU2076	0.24	-0.6
2,159,587	-	cheR-2	DVU2076	0.27	-1.4
2,159,613	+	cheR-2	DVU2076	0.30	-0.3
2,159,624	+	cheR-2	DVU2076	0.32	-0.8
2,159,639	-	cheR-2	DVU2076	0.33	-1.2
2,159,678	+	cheR-2	DVU2076	0.38	-0.1
2,159,849	+	cheR-2	DVU2076	0.57	-1.2
2,159,871	+	cheR-2	DVU2076	0.60	+3.2
2,159,874	-	cheR-2	DVU2076	0.60	-1.4
2,159,902	+	cheR-2	DVU2076	0.63	-0.4
2,160,024	+	cheR-2	DVU2076	0.77	-2.0
2,160,039	+	cheR-2	DVU2076	0.79	+1.2
2,160,098	-	cheR-2	DVU2076	0.85	-0.4
2,160,121	-	cheR-2	DVU2076	0.88	-0.7
2,160,138	+				-1.2
2,160,222	+				-0.9
2,160,806	-		DVU2077	0.30	-0.8
2,160,864	+		DVU2077	0.33	-0.1
2,160,912	+		DVU2077	0.36	-0.0
2,160,922	-		DVU2077	0.36	+0.1
2,160,984	+		DVU2077	0.40	-1.9
2,160,999	-		DVU2077	0.40	+0.2