Experiment: RCH2_defined_Glucose_noNitrogen in Eppendorf tube with 0.1 mM glass beads
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24890 and BWI76_RS24895 are separated by 45 nucleotides BWI76_RS24895 and BWI76_RS24900 are separated by 110 nucleotides BWI76_RS24900 and BWI76_RS24905 are separated by 64 nucleotides
BWI76_RS24890: BWI76_RS24890 - PTS system galactitol-specific transporter subunit IIC, at 5,186,094 to 5,187,467
_RS24890
BWI76_RS24895: BWI76_RS24895 - galactitol-1-phosphate 5-dehydrogenase, at 5,187,513 to 5,188,556
_RS24895
BWI76_RS24900: BWI76_RS24900 - DeoR family transcriptional regulator, at 5,188,667 to 5,189,440
_RS24900
BWI76_RS24905: BWI76_RS24905 - filamentation induced by cAMP protein fic, at 5,189,505 to 5,190,506
_RS24905
Position (kb) 5187
5188
5189 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5186.795 kb on - strand, within BWI76_RS24890 at 5186.815 kb on - strand, within BWI76_RS24890 at 5186.865 kb on - strand, within BWI76_RS24890 at 5187.146 kb on - strand, within BWI76_RS24890 at 5187.150 kb on - strand, within BWI76_RS24890 at 5187.205 kb on - strand, within BWI76_RS24890 at 5187.219 kb on + strand, within BWI76_RS24890 at 5187.285 kb on + strand, within BWI76_RS24890 at 5187.285 kb on + strand, within BWI76_RS24890 at 5187.323 kb on + strand, within BWI76_RS24890 at 5187.348 kb on - strand at 5187.368 kb on + strand at 5187.476 kb on - strand at 5187.530 kb on - strand at 5187.530 kb on - strand at 5187.621 kb on - strand, within BWI76_RS24895 at 5187.899 kb on - strand, within BWI76_RS24895 at 5188.147 kb on + strand, within BWI76_RS24895 at 5188.147 kb on + strand, within BWI76_RS24895 at 5188.286 kb on + strand, within BWI76_RS24895 at 5188.324 kb on - strand, within BWI76_RS24895 at 5188.389 kb on - strand, within BWI76_RS24895 at 5188.500 kb on + strand at 5188.674 kb on + strand at 5188.833 kb on + strand, within BWI76_RS24900 at 5188.991 kb on + strand, within BWI76_RS24900 at 5189.060 kb on + strand, within BWI76_RS24900 at 5189.135 kb on + strand, within BWI76_RS24900 at 5189.410 kb on - strand at 5189.450 kb on - strand at 5189.470 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_Glucose_noNitrogen in Eppendorf tube with 0.1 mM glass beads remove 5,186,795 - BWI76_RS24890 0.51 -0.2 5,186,815 - BWI76_RS24890 0.52 -0.1 5,186,865 - BWI76_RS24890 0.56 -0.2 5,187,146 - BWI76_RS24890 0.77 +0.0 5,187,150 - BWI76_RS24890 0.77 +0.2 5,187,205 - BWI76_RS24890 0.81 +0.4 5,187,219 + BWI76_RS24890 0.82 +1.2 5,187,285 + BWI76_RS24890 0.87 +0.3 5,187,285 + BWI76_RS24890 0.87 +0.4 5,187,323 + BWI76_RS24890 0.89 +0.0 5,187,348 - +0.7 5,187,368 + -0.2 5,187,476 - -0.3 5,187,530 - -0.4 5,187,530 - -0.4 5,187,621 - BWI76_RS24895 0.10 +0.1 5,187,899 - BWI76_RS24895 0.37 +0.2 5,188,147 + BWI76_RS24895 0.61 -0.4 5,188,147 + BWI76_RS24895 0.61 +2.6 5,188,286 + BWI76_RS24895 0.74 +0.0 5,188,324 - BWI76_RS24895 0.78 +0.2 5,188,389 - BWI76_RS24895 0.84 +0.3 5,188,500 + +0.3 5,188,674 + -0.2 5,188,833 + BWI76_RS24900 0.21 +0.3 5,188,991 + BWI76_RS24900 0.42 +1.0 5,189,060 + BWI76_RS24900 0.51 +0.3 5,189,135 + BWI76_RS24900 0.60 -0.1 5,189,410 - -1.9 5,189,450 - -0.1 5,189,470 + -0.3
Or see this region's nucleotide sequence