Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1874

Experiment: KB with Avocatin A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin A 10 mM
2,148,315	+				+2.4
2,148,373	-				-1.7
2,148,382	-				+0.5
2,148,482	+				-0.6
2,148,482	+				-0.7
2,148,482	+				-0.6
2,148,482	+				-1.6
2,148,482	+				-0.8
2,148,482	+				-0.3
2,148,482	+				+0.2
2,148,482	+				+0.6
2,148,482	+				-1.2
2,148,482	+				+1.5
2,148,482	+				-0.2
2,148,483	-				-0.3
2,148,483	-				+0.7
2,148,483	-				+0.8
2,148,483	-				+2.4
2,148,483	-				+1.8
2,148,483	-				-1.0
2,148,490	+				+2.7
2,148,500	+				-0.2
2,148,552	+				+0.3
2,148,572	-		Psyr_1873	0.12	+0.2
2,148,572	-		Psyr_1873	0.12	-0.5
2,148,612	+		Psyr_1873	0.18	-0.6
2,148,613	-		Psyr_1873	0.18	-1.3
2,148,663	+		Psyr_1873	0.25	-1.0
2,148,664	-		Psyr_1873	0.25	-0.1
2,148,729	+		Psyr_1873	0.34	+0.1
2,148,729	+		Psyr_1873	0.34	-1.9
2,148,730	-		Psyr_1873	0.34	+0.2
2,148,730	-		Psyr_1873	0.34	-1.4
2,149,000	-		Psyr_1873	0.71	-0.5
2,149,004	+		Psyr_1873	0.71	+0.3
2,149,004	+		Psyr_1873	0.71	-1.2
2,149,005	-		Psyr_1873	0.72	+1.8
2,149,107	+		Psyr_1873	0.86	-0.3
2,149,107	+		Psyr_1873	0.86	-1.4
2,149,107	+		Psyr_1873	0.86	+0.8
2,149,107	+		Psyr_1873	0.86	+0.2
2,149,278	+				-0.5
2,149,316	+				+0.6
2,149,317	-				+0.1
2,149,351	+				-1.8
2,149,399	+		Psyr_1874	0.13	+1.0
2,149,399	+		Psyr_1874	0.13	-0.1
2,149,400	-		Psyr_1874	0.13	+0.4
2,149,400	-		Psyr_1874	0.13	-0.8
2,149,660	+		Psyr_1874	0.40	+1.2
2,149,674	+		Psyr_1874	0.41	+0.1
2,149,792	+		Psyr_1874	0.53	-0.2
2,149,792	+		Psyr_1874	0.53	+0.3
2,149,792	+		Psyr_1874	0.53	-1.3
2,149,793	-		Psyr_1874	0.53	-2.4
2,149,822	+		Psyr_1874	0.56	+0.5
2,149,852	-		Psyr_1874	0.59	-1.0
2,149,892	-		Psyr_1874	0.63	-1.9
2,149,925	+		Psyr_1874	0.67	-1.8
2,149,925	+		Psyr_1874	0.67	+0.4
2,149,925	+		Psyr_1874	0.67	-1.6
2,149,925	+		Psyr_1874	0.67	+0.0
2,149,926	-		Psyr_1874	0.67	-0.4
2,149,927	+		Psyr_1874	0.67	-2.7
2,149,928	-		Psyr_1874	0.67	-0.6
2,149,928	-		Psyr_1874	0.67	+0.0
2,149,928	-		Psyr_1874	0.67	-3.2
2,149,946	+		Psyr_1874	0.69	+0.9
2,149,993	+		Psyr_1874	0.74	+0.6
2,149,993	+		Psyr_1874	0.74	-0.8
2,149,993	+		Psyr_1874	0.74	-1.8
2,150,136	+		Psyr_1874	0.89	-0.2
2,150,137	-		Psyr_1874	0.89	-0.6
2,150,192	+				-0.9
2,150,193	-				-0.6
2,150,218	+				-1.3
2,150,218	+				-0.2
2,150,219	-				+1.1
2,150,219	-				-1.3
2,150,320	-				+0.0
2,150,465	+		Psyr_1875	0.14	+0.8
2,150,465	+		Psyr_1875	0.14	+3.0
2,150,465	+		Psyr_1875	0.14	+0.7
2,150,466	-		Psyr_1875	0.14	-0.6
2,151,040	+				-0.2
2,151,074	-				-0.9
2,151,113	+				+0.3
2,151,113	+				-0.0
2,151,213	+				-0.4
2,151,213	+				-0.8
2,151,214	-				+0.4
2,151,214	-				-0.4
2,151,214	-				-0.7