Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06436 and H281DRAFT_06437 are separated by 18 nucleotides H281DRAFT_06437 and H281DRAFT_06438 are separated by 4 nucleotides H281DRAFT_06438 and H281DRAFT_06439 are separated by 130 nucleotides
H281DRAFT_06436: H281DRAFT_06436 - putative membrane protein, at 39,777 to 40,700
_06436
H281DRAFT_06437: H281DRAFT_06437 - FdhD protein, at 40,719 to 41,585
_06437
H281DRAFT_06438: H281DRAFT_06438 - hypothetical protein, at 41,590 to 41,883
_06438
H281DRAFT_06439: H281DRAFT_06439 - transcriptional regulator, GntR family, at 42,014 to 43,441
_06439
Position (kb) 41
42 Strain fitness (log2 ratio) -2
-1
0
1
2 at 40.695 kb on - strand at 41.084 kb on - strand, within H281DRAFT_06437 at 41.162 kb on + strand, within H281DRAFT_06437 at 41.163 kb on - strand, within H281DRAFT_06437 at 41.165 kb on - strand, within H281DRAFT_06437 at 41.417 kb on + strand, within H281DRAFT_06437 at 41.520 kb on + strand at 41.521 kb on - strand at 41.556 kb on - strand at 41.712 kb on + strand, within H281DRAFT_06438 at 41.712 kb on + strand, within H281DRAFT_06438 at 41.923 kb on + strand at 41.967 kb on + strand at 42.049 kb on + strand at 42.049 kb on + strand at 42.105 kb on + strand at 42.106 kb on - strand at 42.253 kb on + strand at 42.253 kb on + strand, within H281DRAFT_06439 at 42.316 kb on - strand, within H281DRAFT_06439 at 42.494 kb on - strand, within H281DRAFT_06439 at 42.535 kb on - strand, within H281DRAFT_06439 at 42.582 kb on + strand, within H281DRAFT_06439 at 42.585 kb on - strand, within H281DRAFT_06439 at 42.585 kb on - strand, within H281DRAFT_06439 at 42.585 kb on - strand, within H281DRAFT_06439 at 42.822 kb on + strand, within H281DRAFT_06439 at 42.822 kb on + strand at 42.823 kb on - strand, within H281DRAFT_06439
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 40,695 - +0.1 41,084 - H281DRAFT_06437 0.42 +0.2 41,162 + H281DRAFT_06437 0.51 -1.1 41,163 - H281DRAFT_06437 0.51 +0.1 41,165 - H281DRAFT_06437 0.51 -0.5 41,417 + H281DRAFT_06437 0.81 -0.9 41,520 + -2.0 41,521 - -1.2 41,556 - +0.1 41,712 + H281DRAFT_06438 0.41 -1.1 41,712 + H281DRAFT_06438 0.41 -1.4 41,923 + -0.1 41,967 + -0.6 42,049 + -0.9 42,049 + +0.1 42,105 + +0.1 42,106 - -0.8 42,253 + +1.9 42,253 + H281DRAFT_06439 0.17 +0.3 42,316 - H281DRAFT_06439 0.21 +0.0 42,494 - H281DRAFT_06439 0.34 +0.3 42,535 - H281DRAFT_06439 0.36 -1.6 42,582 + H281DRAFT_06439 0.40 +1.5 42,585 - H281DRAFT_06439 0.40 +0.6 42,585 - H281DRAFT_06439 0.40 -0.4 42,585 - H281DRAFT_06439 0.40 -0.0 42,822 + H281DRAFT_06439 0.57 +1.3 42,822 + -0.6 42,823 - H281DRAFT_06439 0.57 -1.2
Or see this region's nucleotide sequence