Experiment: KB with Avocatin B 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4290 and Psyr_4291 are separated by 61 nucleotides Psyr_4291 and Psyr_4292 are separated by 877 nucleotides
Psyr_4290: Psyr_4290 - conserved domain protein, at 5,116,745 to 5,117,734
_4290
Psyr_4291: Psyr_4291 - hypothetical protein, at 5,117,796 to 5,118,161
_4291
Psyr_4292: Psyr_4292 - HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1, at 5,119,039 to 5,119,629
_4292
Position (kb) 5117
5118
5119 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5116.894 kb on - strand, within Psyr_4290 at 5116.894 kb on - strand, within Psyr_4290 at 5116.894 kb on - strand, within Psyr_4290 at 5116.961 kb on + strand, within Psyr_4290 at 5116.962 kb on - strand, within Psyr_4290 at 5116.962 kb on - strand, within Psyr_4290 at 5116.962 kb on - strand, within Psyr_4290 at 5117.319 kb on - strand, within Psyr_4290 at 5117.319 kb on - strand, within Psyr_4290 at 5117.342 kb on + strand, within Psyr_4290 at 5117.343 kb on - strand, within Psyr_4290 at 5117.415 kb on - strand, within Psyr_4290 at 5117.415 kb on - strand, within Psyr_4290 at 5117.415 kb on - strand, within Psyr_4290 at 5117.438 kb on + strand, within Psyr_4290 at 5117.439 kb on - strand, within Psyr_4290 at 5117.439 kb on - strand, within Psyr_4290 at 5117.477 kb on + strand, within Psyr_4290 at 5117.477 kb on + strand, within Psyr_4290 at 5117.477 kb on + strand, within Psyr_4290 at 5117.498 kb on + strand, within Psyr_4290 at 5117.498 kb on + strand, within Psyr_4290 at 5117.498 kb on + strand, within Psyr_4290 at 5117.498 kb on + strand, within Psyr_4290 at 5117.498 kb on + strand, within Psyr_4290 at 5117.499 kb on - strand, within Psyr_4290 at 5117.499 kb on - strand, within Psyr_4290 at 5117.499 kb on - strand, within Psyr_4290 at 5117.499 kb on - strand, within Psyr_4290 at 5117.499 kb on - strand, within Psyr_4290 at 5117.499 kb on - strand, within Psyr_4290 at 5117.499 kb on - strand, within Psyr_4290 at 5117.600 kb on + strand, within Psyr_4290 at 5117.600 kb on + strand, within Psyr_4290 at 5117.600 kb on + strand, within Psyr_4290 at 5117.601 kb on - strand, within Psyr_4290 at 5117.601 kb on - strand, within Psyr_4290 at 5117.601 kb on - strand, within Psyr_4290 at 5117.601 kb on - strand, within Psyr_4290 at 5117.601 kb on - strand, within Psyr_4290 at 5117.601 kb on - strand, within Psyr_4290 at 5117.609 kb on + strand, within Psyr_4290 at 5117.609 kb on + strand, within Psyr_4290 at 5117.609 kb on + strand, within Psyr_4290 at 5117.610 kb on - strand, within Psyr_4290 at 5117.610 kb on - strand, within Psyr_4290 at 5117.745 kb on + strand at 5117.747 kb on + strand at 5117.747 kb on + strand at 5117.747 kb on + strand at 5117.747 kb on + strand at 5117.747 kb on + strand at 5117.747 kb on + strand at 5117.747 kb on + strand at 5117.747 kb on + strand at 5117.747 kb on + strand at 5117.747 kb on + strand at 5117.747 kb on + strand at 5117.747 kb on + strand at 5117.747 kb on + strand at 5117.747 kb on + strand at 5117.748 kb on - strand at 5117.748 kb on - strand at 5117.748 kb on - strand at 5117.748 kb on - strand at 5117.748 kb on - strand at 5117.748 kb on - strand at 5117.748 kb on - strand at 5117.748 kb on - strand at 5117.748 kb on - strand at 5117.748 kb on - strand at 5117.748 kb on - strand at 5117.748 kb on - strand at 5117.751 kb on + strand at 5117.751 kb on + strand at 5117.751 kb on + strand at 5117.751 kb on + strand at 5117.751 kb on + strand at 5117.752 kb on - strand at 5117.752 kb on - strand at 5117.780 kb on - strand at 5117.780 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.784 kb on - strand at 5117.848 kb on + strand, within Psyr_4291 at 5117.848 kb on + strand, within Psyr_4291 at 5117.848 kb on + strand, within Psyr_4291 at 5117.849 kb on - strand, within Psyr_4291 at 5117.849 kb on - strand, within Psyr_4291 at 5117.849 kb on - strand, within Psyr_4291 at 5117.876 kb on - strand, within Psyr_4291 at 5117.876 kb on - strand, within Psyr_4291 at 5118.111 kb on + strand, within Psyr_4291 at 5118.111 kb on + strand, within Psyr_4291 at 5118.111 kb on + strand, within Psyr_4291 at 5118.111 kb on + strand, within Psyr_4291 at 5118.111 kb on + strand, within Psyr_4291 at 5118.111 kb on + strand, within Psyr_4291 at 5118.111 kb on + strand, within Psyr_4291 at 5118.111 kb on + strand, within Psyr_4291 at 5118.111 kb on + strand, within Psyr_4291 at 5118.111 kb on + strand, within Psyr_4291 at 5118.111 kb on + strand, within Psyr_4291 at 5118.111 kb on + strand, within Psyr_4291 at 5118.111 kb on + strand, within Psyr_4291 at 5118.111 kb on + strand, within Psyr_4291 at 5118.111 kb on + strand, within Psyr_4291 at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.770 kb on - strand at 5118.770 kb on - strand at 5118.770 kb on - strand at 5118.770 kb on - strand at 5118.770 kb on - strand at 5118.770 kb on - strand at 5118.771 kb on + strand at 5118.771 kb on + strand at 5118.771 kb on + strand at 5118.771 kb on + strand at 5118.771 kb on + strand at 5118.771 kb on + strand at 5118.772 kb on - strand at 5118.772 kb on - strand at 5118.772 kb on - strand at 5118.772 kb on - strand at 5118.772 kb on - strand at 5118.772 kb on - strand at 5118.773 kb on + strand at 5118.773 kb on + strand at 5118.773 kb on + strand at 5118.773 kb on + strand at 5118.773 kb on + strand at 5118.774 kb on - strand at 5118.774 kb on - strand at 5118.774 kb on - strand at 5118.783 kb on + strand at 5118.783 kb on + strand at 5118.783 kb on + strand at 5118.783 kb on + strand at 5118.784 kb on - strand at 5118.784 kb on - strand at 5118.834 kb on - strand at 5118.834 kb on - strand at 5118.946 kb on + strand at 5118.946 kb on + strand at 5118.946 kb on + strand at 5118.946 kb on + strand at 5118.946 kb on + strand at 5118.948 kb on + strand at 5118.948 kb on + strand at 5118.948 kb on + strand at 5118.948 kb on + strand at 5118.960 kb on + strand at 5118.960 kb on + strand at 5118.960 kb on + strand at 5118.960 kb on + strand at 5119.026 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Avocatin B 10 mM remove 5,116,894 - Psyr_4290 0.15 +0.3 5,116,894 - Psyr_4290 0.15 +0.3 5,116,894 - Psyr_4290 0.15 +0.1 5,116,961 + Psyr_4290 0.22 -0.7 5,116,962 - Psyr_4290 0.22 +0.4 5,116,962 - Psyr_4290 0.22 -0.8 5,116,962 - Psyr_4290 0.22 +0.1 5,117,319 - Psyr_4290 0.58 -0.8 5,117,319 - Psyr_4290 0.58 +0.9 5,117,342 + Psyr_4290 0.60 -0.1 5,117,343 - Psyr_4290 0.60 +0.4 5,117,415 - Psyr_4290 0.68 +0.4 5,117,415 - Psyr_4290 0.68 -0.4 5,117,415 - Psyr_4290 0.68 -0.4 5,117,438 + Psyr_4290 0.70 -0.7 5,117,439 - Psyr_4290 0.70 +0.4 5,117,439 - Psyr_4290 0.70 +1.1 5,117,477 + Psyr_4290 0.74 -0.2 5,117,477 + Psyr_4290 0.74 -0.1 5,117,477 + Psyr_4290 0.74 +0.0 5,117,498 + Psyr_4290 0.76 -0.8 5,117,498 + Psyr_4290 0.76 +0.4 5,117,498 + Psyr_4290 0.76 +0.4 5,117,498 + Psyr_4290 0.76 +1.3 5,117,498 + Psyr_4290 0.76 -1.0 5,117,499 - Psyr_4290 0.76 -0.7 5,117,499 - Psyr_4290 0.76 +2.6 5,117,499 - Psyr_4290 0.76 +0.4 5,117,499 - Psyr_4290 0.76 +1.4 5,117,499 - Psyr_4290 0.76 -1.0 5,117,499 - Psyr_4290 0.76 -0.6 5,117,499 - Psyr_4290 0.76 -0.4 5,117,600 + Psyr_4290 0.86 +0.1 5,117,600 + Psyr_4290 0.86 -0.2 5,117,600 + Psyr_4290 0.86 +0.6 5,117,601 - Psyr_4290 0.86 -0.5 5,117,601 - Psyr_4290 0.86 -0.5 5,117,601 - Psyr_4290 0.86 +0.5 5,117,601 - Psyr_4290 0.86 +0.3 5,117,601 - Psyr_4290 0.86 -0.4 5,117,601 - Psyr_4290 0.86 -2.0 5,117,609 + Psyr_4290 0.87 +2.0 5,117,609 + Psyr_4290 0.87 +0.5 5,117,609 + Psyr_4290 0.87 -0.1 5,117,610 - Psyr_4290 0.87 -0.3 5,117,610 - Psyr_4290 0.87 -0.7 5,117,745 + +0.1 5,117,747 + +0.3 5,117,747 + -0.8 5,117,747 + -0.3 5,117,747 + -1.7 5,117,747 + +0.3 5,117,747 + +0.4 5,117,747 + +0.1 5,117,747 + +0.4 5,117,747 + +0.3 5,117,747 + -0.5 5,117,747 + -0.8 5,117,747 + +0.7 5,117,747 + +0.2 5,117,747 + -1.0 5,117,748 - -0.8 5,117,748 - +2.3 5,117,748 - -0.4 5,117,748 - +1.3 5,117,748 - -0.0 5,117,748 - +0.4 5,117,748 - -0.2 5,117,748 - -0.3 5,117,748 - +0.3 5,117,748 - -0.5 5,117,748 - +0.8 5,117,748 - +1.6 5,117,751 + -0.1 5,117,751 + +0.7 5,117,751 + -1.1 5,117,751 + -0.1 5,117,751 + +0.5 5,117,752 - +0.6 5,117,752 - +1.6 5,117,780 - -0.6 5,117,780 - -1.5 5,117,784 - -0.7 5,117,784 - +0.2 5,117,784 - -0.3 5,117,784 - -1.4 5,117,784 - -1.6 5,117,784 - +0.1 5,117,784 - +0.1 5,117,784 - -0.8 5,117,784 - +0.0 5,117,784 - +1.0 5,117,784 - +0.1 5,117,784 - -0.6 5,117,784 - +1.7 5,117,784 - -0.1 5,117,784 - -0.9 5,117,784 - +0.2 5,117,784 - +0.4 5,117,784 - +0.6 5,117,784 - -1.3 5,117,784 - -1.1 5,117,784 - +0.8 5,117,848 + Psyr_4291 0.14 +0.2 5,117,848 + Psyr_4291 0.14 +1.4 5,117,848 + Psyr_4291 0.14 +0.7 5,117,849 - Psyr_4291 0.14 +0.3 5,117,849 - Psyr_4291 0.14 -0.6 5,117,849 - Psyr_4291 0.14 +0.2 5,117,876 - Psyr_4291 0.22 -1.3 5,117,876 - Psyr_4291 0.22 +0.4 5,118,111 + Psyr_4291 0.86 +0.3 5,118,111 + Psyr_4291 0.86 +0.8 5,118,111 + Psyr_4291 0.86 -0.5 5,118,111 + Psyr_4291 0.86 -0.3 5,118,111 + Psyr_4291 0.86 +1.1 5,118,111 + Psyr_4291 0.86 +1.2 5,118,111 + Psyr_4291 0.86 +0.2 5,118,111 + Psyr_4291 0.86 +0.1 5,118,111 + Psyr_4291 0.86 +1.1 5,118,111 + Psyr_4291 0.86 +0.5 5,118,111 + Psyr_4291 0.86 +0.3 5,118,111 + Psyr_4291 0.86 -0.4 5,118,111 + Psyr_4291 0.86 -1.4 5,118,111 + Psyr_4291 0.86 +0.7 5,118,111 + Psyr_4291 0.86 +0.9 5,118,769 + +0.6 5,118,769 + +0.7 5,118,769 + +0.4 5,118,769 + +1.0 5,118,769 + -1.0 5,118,769 + +3.6 5,118,769 + +1.6 5,118,769 + -1.2 5,118,769 + -0.1 5,118,769 + +2.0 5,118,769 + +0.5 5,118,769 + +0.5 5,118,769 + +0.1 5,118,769 + -0.9 5,118,770 - +0.5 5,118,770 - -0.1 5,118,770 - -1.6 5,118,770 - -0.2 5,118,770 - +0.7 5,118,770 - -0.8 5,118,771 + +0.8 5,118,771 + +0.2 5,118,771 + +0.8 5,118,771 + -0.4 5,118,771 + -0.6 5,118,771 + -0.0 5,118,772 - +0.3 5,118,772 - +3.3 5,118,772 - +3.7 5,118,772 - +0.0 5,118,772 - +1.2 5,118,772 - +0.5 5,118,773 + -0.1 5,118,773 + +1.5 5,118,773 + +0.1 5,118,773 + -2.2 5,118,773 + +1.0 5,118,774 - +0.6 5,118,774 - +0.8 5,118,774 - +2.0 5,118,783 + +0.8 5,118,783 + -0.3 5,118,783 + -0.6 5,118,783 + -0.5 5,118,784 - +0.1 5,118,784 - +2.6 5,118,834 - -0.9 5,118,834 - +1.4 5,118,946 + -2.5 5,118,946 + +0.5 5,118,946 + -0.3 5,118,946 + +1.7 5,118,946 + -1.3 5,118,948 + +1.1 5,118,948 + -0.4 5,118,948 + +0.7 5,118,948 + -0.9 5,118,960 + -0.7 5,118,960 + +0.6 5,118,960 + -1.1 5,118,960 + +0.3 5,119,026 + -1.9
Or see this region's nucleotide sequence