Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3997

Experiment: KB with Curcumin 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Curcumin 10 mM
4,759,054	+		Psyr_3996	0.72	-0.0
4,759,054	+		Psyr_3996	0.72	+0.0
4,759,054	+		Psyr_3996	0.72	+0.9
4,759,054	+		Psyr_3996	0.72	+0.1
4,759,054	+		Psyr_3996	0.72	-0.9
4,759,054	+		Psyr_3996	0.72	-0.8
4,759,054	+		Psyr_3996	0.72	+1.4
4,759,054	+		Psyr_3996	0.72	+2.1
4,759,054	+		Psyr_3996	0.72	+0.3
4,759,054	+		Psyr_3996	0.72	-0.4
4,759,054	+		Psyr_3996	0.72	+0.4
4,759,055	-		Psyr_3996	0.72	-0.8
4,759,055	-		Psyr_3996	0.72	+0.5
4,759,055	-		Psyr_3996	0.72	+0.4
4,759,055	-		Psyr_3996	0.72	-0.1
4,759,055	-		Psyr_3996	0.72	-0.6
4,759,055	-		Psyr_3996	0.72	+0.6
4,759,055	-		Psyr_3996	0.72	-0.6
4,759,055	-		Psyr_3996	0.72	-0.0
4,759,055	-		Psyr_3996	0.72	+0.6
4,759,055	-		Psyr_3996	0.72	+0.4
4,759,055	-		Psyr_3996	0.72	+0.2
4,759,056	+		Psyr_3996	0.72	+0.6
4,759,056	+		Psyr_3996	0.72	-0.6
4,759,056	+		Psyr_3996	0.72	-0.4
4,759,057	-		Psyr_3996	0.72	+4.7
4,759,057	-		Psyr_3996	0.72	-0.8
4,759,057	-		Psyr_3996	0.72	-1.0
4,759,057	-		Psyr_3996	0.72	+2.2
4,759,057	-		Psyr_3996	0.72	+0.2
4,759,057	-		Psyr_3996	0.72	+1.4
4,759,057	-		Psyr_3996	0.72	-0.3
4,759,058	+		Psyr_3996	0.72	-0.8
4,759,058	+		Psyr_3996	0.72	-0.8
4,759,058	+		Psyr_3996	0.72	+2.5
4,759,058	+		Psyr_3996	0.72	-0.4
4,759,058	+		Psyr_3996	0.72	+0.1
4,759,058	+		Psyr_3996	0.72	-0.0
4,759,058	+		Psyr_3996	0.72	-0.4
4,759,058	+		Psyr_3996	0.72	+1.3
4,759,058	+		Psyr_3996	0.72	+0.2
4,759,059	-		Psyr_3996	0.72	+1.5
4,759,059	-		Psyr_3996	0.72	+0.1
4,759,059	-		Psyr_3996	0.72	-0.4
4,759,059	-		Psyr_3996	0.72	+0.4
4,759,059	-		Psyr_3996	0.72	+0.9
4,759,059	-		Psyr_3996	0.72	-0.3
4,759,059	-		Psyr_3996	0.72	-0.5
4,759,059	-		Psyr_3996	0.72	-0.6
4,759,059	-		Psyr_3996	0.72	-1.2
4,759,059	-		Psyr_3996	0.72	+0.8
4,759,059	-		Psyr_3996	0.72	-0.2
4,759,059	-		Psyr_3996	0.72	+0.3
4,759,069	+		Psyr_3996	0.73	+0.0
4,759,069	+		Psyr_3996	0.73	+0.9
4,759,069	+		Psyr_3996	0.73	-0.6
4,759,069	+		Psyr_3996	0.73	-1.3
4,759,069	+		Psyr_3996	0.73	-0.9
4,759,069	+		Psyr_3996	0.73	+0.2
4,759,070	-		Psyr_3996	0.73	-1.8
4,759,070	-		Psyr_3996	0.73	-0.1
4,759,070	-		Psyr_3996	0.73	-0.8
4,759,070	-		Psyr_3996	0.73	-1.3
4,759,070	-		Psyr_3996	0.73	+0.7
4,759,070	-		Psyr_3996	0.73	+0.1
4,759,070	-		Psyr_3996	0.73	-1.4
4,759,073	+		Psyr_3996	0.73	-1.2
4,759,073	+		Psyr_3996	0.73	+0.9
4,759,073	+		Psyr_3996	0.73	+0.8
4,759,073	+		Psyr_3996	0.73	+0.4
4,759,073	+		Psyr_3996	0.73	-0.7
4,759,073	+		Psyr_3996	0.73	-1.7
4,759,073	+		Psyr_3996	0.73	-1.1
4,759,073	+		Psyr_3996	0.73	-0.1
4,759,073	+		Psyr_3996	0.73	+0.3
4,759,074	-		Psyr_3996	0.73	+0.4
4,759,074	-		Psyr_3996	0.73	-1.5
4,759,074	-		Psyr_3996	0.73	+0.3
4,759,074	-		Psyr_3996	0.73	-1.2
4,759,074	-		Psyr_3996	0.73	-0.2
4,759,074	-		Psyr_3996	0.73	-0.4
4,759,074	-		Psyr_3996	0.73	+0.9
4,759,074	-		Psyr_3996	0.73	+0.9
4,759,074	-		Psyr_3996	0.73	-0.9
4,759,144	+		Psyr_3996	0.76	-1.3
4,759,144	+		Psyr_3996	0.76	+1.9
4,759,144	+				+1.9
4,759,144	+		Psyr_3996	0.76	-2.0
4,759,144	+		Psyr_3996	0.76	+0.0
4,759,144	+		Psyr_3996	0.76	-0.3
4,759,144	+		Psyr_3996	0.76	-1.1
4,759,144	+		Psyr_3996	0.76	+0.9
4,759,144	+		Psyr_3996	0.76	-0.4
4,759,144	+		Psyr_3996	0.76	-1.1
4,759,144	+		Psyr_3996	0.76	-0.1
4,759,145	-		Psyr_3996	0.76	-0.8
4,759,145	-		Psyr_3996	0.76	+0.2
4,759,145	-		Psyr_3996	0.76	-1.1
4,759,145	-		Psyr_3996	0.76	-0.5
4,759,146	+		Psyr_3996	0.76	-0.2
4,759,146	+		Psyr_3996	0.76	+0.9
4,759,147	-		Psyr_3996	0.76	-0.4
4,759,194	-		Psyr_3996	0.78	-1.4
4,759,384	+		Psyr_3996	0.86	+0.0
4,759,384	+		Psyr_3996	0.86	+0.9
4,759,384	+		Psyr_3996	0.86	+0.8
4,759,384	+		Psyr_3996	0.86	+0.9
4,759,384	+		Psyr_3996	0.86	-0.1
4,759,384	+		Psyr_3996	0.86	-1.0
4,759,385	-		Psyr_3996	0.86	-0.0
4,759,385	-		Psyr_3996	0.86	-0.6
4,759,385	-		Psyr_3996	0.86	-3.4
4,759,385	-		Psyr_3996	0.86	-0.1
4,759,385	-		Psyr_3996	0.86	-1.1
4,759,385	-		Psyr_3996	0.86	+0.1
4,759,534	+				-1.4
4,759,535	-				+0.0
4,759,535	-				-0.9
4,759,654	+				-0.5
4,759,768	+				-1.3
4,759,801	+				-0.6
4,759,801	+				-0.1
4,759,802	-				-1.8
4,759,861	+				-0.7
4,759,861	+				+0.7
4,759,861	+				+1.0
4,759,981	+				-0.1
4,759,982	-				+1.1
4,760,090	+		Psyr_3997	0.12	+1.6
4,760,090	+		Psyr_3997	0.12	-0.0
4,760,091	-		Psyr_3997	0.12	+0.5
4,760,128	+		Psyr_3997	0.14	-0.1
4,760,129	-		Psyr_3997	0.15	-0.8
4,760,132	+		Psyr_3997	0.15	-1.7
4,760,220	+		Psyr_3997	0.20	+0.3
4,760,257	+		Psyr_3997	0.22	+0.3
4,760,269	+		Psyr_3997	0.23	-1.1
4,760,269	+		Psyr_3997	0.23	-0.4
4,760,270	-		Psyr_3997	0.23	-0.9
4,760,340	-		Psyr_3997	0.27	+1.4
4,760,445	+		Psyr_3997	0.33	-1.8
4,760,445	+		Psyr_3997	0.33	+0.7
4,760,445	+		Psyr_3997	0.33	+0.4
4,760,446	-		Psyr_3997	0.33	+0.7
4,760,446	-		Psyr_3997	0.33	+0.3
4,760,446	-		Psyr_3997	0.33	-1.5
4,760,446	-		Psyr_3997	0.33	-0.0
4,760,631	+		Psyr_3997	0.44	-0.0
4,760,632	-		Psyr_3997	0.44	+0.2
4,760,669	-		Psyr_3997	0.46	+0.1
4,760,669	-		Psyr_3997	0.46	+0.3
4,760,963	+		Psyr_3997	0.64	-0.2
4,760,964	-		Psyr_3997	0.64	+0.2
4,760,964	-		Psyr_3997	0.64	-0.1
4,761,005	+		Psyr_3997	0.66	-0.9
4,761,020	+		Psyr_3997	0.67	+1.9
4,761,020	+		Psyr_3997	0.67	+1.4
4,761,020	+		Psyr_3997	0.67	+0.9
4,761,020	+		Psyr_3997	0.67	+0.3
4,761,020	+		Psyr_3997	0.67	-0.8
4,761,021	-		Psyr_3997	0.67	-0.1
4,761,021	-		Psyr_3997	0.67	-0.1
4,761,106	+		Psyr_3997	0.72	+1.7
4,761,107	-		Psyr_3997	0.72	+0.2
4,761,107	-		Psyr_3997	0.72	+0.4
4,761,136	+		Psyr_3997	0.74	+0.2
4,761,136	+		Psyr_3997	0.74	+0.9
4,761,223	+		Psyr_3997	0.79	+1.7
4,761,223	+		Psyr_3997	0.79	+1.5
4,761,224	-		Psyr_3997	0.79	+0.2
4,761,224	-		Psyr_3997	0.79	-0.7
4,761,227	+		Psyr_3997	0.79	+0.4
4,761,228	-		Psyr_3997	0.79	-0.3
4,761,236	-		Psyr_3997	0.80	+1.9
4,761,333	+		Psyr_3997	0.86	-0.4
4,761,333	+		Psyr_3997	0.86	-1.3
4,761,333	+		Psyr_3997	0.86	+0.4
4,761,334	-		Psyr_3997	0.86	-0.0
4,761,334	-		Psyr_3997	0.86	-0.5
4,761,334	-		Psyr_3997	0.86	+0.0
4,761,334	-		Psyr_3997	0.86	+1.7
4,761,334	-		Psyr_3997	0.86	+0.1
4,761,351	+		Psyr_3997	0.87	-1.0
4,761,351	+		Psyr_3997	0.87	-1.6
4,761,426	-				-1.0
4,761,426	-				+0.7
4,761,580	+				+1.9
4,761,580	+				+0.5
4,761,580	+				-1.1
4,761,581	-				-1.3
4,761,581	-				+3.2
4,761,581	-				+0.7
4,761,581	-				-0.3
4,761,581	-				-1.4
4,761,593	+				+0.4
4,761,593	+				-1.1
4,761,594	-				-0.9
4,761,594	-				+0.3
4,761,640	+				-0.4
4,761,640	+				+0.5
4,761,641	-				+0.3
4,761,709	+				+0.6
4,762,052	-		Psyr_3998	0.31	+0.6
4,762,052	-		Psyr_3998	0.31	-1.0
4,762,280	+		Psyr_3998	0.46	+0.3
4,762,367	-		Psyr_3998	0.51	-2.3
4,762,516	-		Psyr_3998	0.61	+0.2