Experiment: KB with Dimethyl Sulfoxide 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4419 and Psyr_4420 overlap by 4 nucleotides
Psyr_4419: Psyr_4419 - Cobalamin (vitamin B12) biosynthesis CbiD protein, at 5,283,298 to 5,284,410
_4419
Psyr_4420: Psyr_4420 - precorrin-6A reductase, at 5,284,407 to 5,285,147
_4420
Position (kb) 5284
5285
5286 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5283.591 kb on - strand, within Psyr_4419 at 5283.727 kb on + strand, within Psyr_4419 at 5283.728 kb on - strand, within Psyr_4419 at 5283.728 kb on - strand, within Psyr_4419 at 5283.871 kb on + strand, within Psyr_4419 at 5283.871 kb on + strand, within Psyr_4419 at 5283.871 kb on + strand, within Psyr_4419 at 5283.871 kb on + strand, within Psyr_4419 at 5283.871 kb on + strand, within Psyr_4419 at 5283.872 kb on - strand, within Psyr_4419 at 5283.872 kb on - strand, within Psyr_4419 at 5283.872 kb on - strand, within Psyr_4419 at 5283.872 kb on - strand, within Psyr_4419 at 5283.874 kb on - strand, within Psyr_4419 at 5283.977 kb on - strand, within Psyr_4419 at 5284.482 kb on + strand, within Psyr_4420 at 5284.483 kb on - strand, within Psyr_4420 at 5284.483 kb on - strand, within Psyr_4420 at 5284.483 kb on - strand, within Psyr_4420 at 5284.483 kb on - strand, within Psyr_4420 at 5284.483 kb on - strand, within Psyr_4420 at 5284.572 kb on + strand, within Psyr_4420 at 5284.572 kb on + strand, within Psyr_4420 at 5284.572 kb on + strand, within Psyr_4420 at 5284.572 kb on + strand, within Psyr_4420 at 5284.572 kb on + strand, within Psyr_4420 at 5284.572 kb on + strand, within Psyr_4420 at 5284.573 kb on - strand, within Psyr_4420 at 5284.573 kb on - strand, within Psyr_4420 at 5284.573 kb on - strand, within Psyr_4420 at 5284.573 kb on - strand, within Psyr_4420 at 5284.963 kb on + strand, within Psyr_4420 at 5285.288 kb on + strand at 5285.288 kb on + strand at 5285.288 kb on + strand at 5285.288 kb on + strand at 5285.288 kb on + strand at 5285.288 kb on + strand at 5285.288 kb on + strand at 5285.288 kb on + strand at 5285.288 kb on + strand at 5285.288 kb on + strand at 5285.288 kb on + strand at 5285.288 kb on + strand at 5285.288 kb on + strand at 5285.470 kb on + strand at 5285.470 kb on + strand at 5285.470 kb on + strand at 5285.470 kb on + strand at 5285.470 kb on + strand at 5285.470 kb on + strand at 5285.470 kb on + strand at 5285.470 kb on + strand at 5285.470 kb on + strand at 5285.470 kb on + strand at 5285.470 kb on + strand at 5285.470 kb on + strand at 5285.470 kb on + strand at 5285.470 kb on + strand at 5285.471 kb on - strand at 5285.471 kb on - strand at 5285.471 kb on - strand at 5285.471 kb on - strand at 5285.471 kb on - strand at 5285.471 kb on - strand at 5285.471 kb on - strand at 5285.471 kb on - strand at 5285.471 kb on - strand at 5285.471 kb on - strand at 5285.471 kb on - strand at 5285.471 kb on - strand at 5285.471 kb on - strand at 5285.471 kb on - strand at 5285.471 kb on - strand at 5285.830 kb on - strand at 5285.830 kb on - strand at 5285.830 kb on - strand at 5285.830 kb on - strand at 5285.830 kb on - strand at 5285.830 kb on - strand at 5285.830 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1.25 vol% remove 5,283,591 - Psyr_4419 0.26 -0.6 5,283,727 + Psyr_4419 0.39 -0.4 5,283,728 - Psyr_4419 0.39 -0.7 5,283,728 - Psyr_4419 0.39 +0.2 5,283,871 + Psyr_4419 0.51 -0.6 5,283,871 + Psyr_4419 0.51 +0.4 5,283,871 + Psyr_4419 0.51 -1.1 5,283,871 + Psyr_4419 0.51 +0.7 5,283,871 + Psyr_4419 0.51 +0.7 5,283,872 - Psyr_4419 0.52 -0.9 5,283,872 - Psyr_4419 0.52 -1.6 5,283,872 - Psyr_4419 0.52 +0.2 5,283,872 - Psyr_4419 0.52 +0.2 5,283,874 - Psyr_4419 0.52 -1.2 5,283,977 - Psyr_4419 0.61 +2.7 5,284,482 + Psyr_4420 0.10 +1.2 5,284,483 - Psyr_4420 0.10 +0.2 5,284,483 - Psyr_4420 0.10 -1.5 5,284,483 - Psyr_4420 0.10 -1.5 5,284,483 - Psyr_4420 0.10 -2.2 5,284,483 - Psyr_4420 0.10 -2.9 5,284,572 + Psyr_4420 0.22 -1.4 5,284,572 + Psyr_4420 0.22 -0.6 5,284,572 + Psyr_4420 0.22 +0.9 5,284,572 + Psyr_4420 0.22 +0.2 5,284,572 + Psyr_4420 0.22 +0.6 5,284,572 + Psyr_4420 0.22 -0.4 5,284,573 - Psyr_4420 0.22 -1.2 5,284,573 - Psyr_4420 0.22 -0.8 5,284,573 - Psyr_4420 0.22 -0.5 5,284,573 - Psyr_4420 0.22 -0.7 5,284,963 + Psyr_4420 0.75 +3.2 5,285,288 + +0.9 5,285,288 + -0.6 5,285,288 + -1.3 5,285,288 + -0.7 5,285,288 + -0.8 5,285,288 + -0.6 5,285,288 + -0.0 5,285,288 + -0.2 5,285,288 + -1.7 5,285,288 + +0.4 5,285,288 + +0.2 5,285,288 + +0.2 5,285,288 + -0.2 5,285,470 + +0.6 5,285,470 + -2.2 5,285,470 + -0.4 5,285,470 + -0.4 5,285,470 + -0.3 5,285,470 + +0.1 5,285,470 + -0.1 5,285,470 + +1.0 5,285,470 + -0.7 5,285,470 + -0.6 5,285,470 + -0.6 5,285,470 + +1.2 5,285,470 + +0.9 5,285,470 + +0.4 5,285,471 - -0.6 5,285,471 - +0.8 5,285,471 - -0.4 5,285,471 - +1.0 5,285,471 - +0.6 5,285,471 - -1.4 5,285,471 - -1.8 5,285,471 - -0.5 5,285,471 - -0.6 5,285,471 - +0.1 5,285,471 - +1.0 5,285,471 - +0.8 5,285,471 - +0.3 5,285,471 - +0.6 5,285,471 - +2.6 5,285,830 - -1.2 5,285,830 - +0.8 5,285,830 - -0.8 5,285,830 - +1.6 5,285,830 - -0.0 5,285,830 - +0.2 5,285,830 - +0.2
Or see this region's nucleotide sequence